REAGENT or RESOURCE	SOURCE	IDENTIFIER
Software and algorithms
GATK	McKenna et al.42	https://gatk.broadinstitute.org/hc/en-us
Annovar	Wang et al.43	https://annovar.openbioinformatics.org/en/latest/
RNAEditingIndexer	Roth et al.19	https://github.com/a2iEditing/RNAEditingIndexer
BamUtil	Jun et al.44	https://github.com/mskilab/bamUtils
Survival	Therneau and Grambsch22	https://github.com/therneau/survival
Survminer	NA	https://rpkgs.datanovia.com/survminer/index.html
edgeR	Robinson et al.45	https://bioconductor.org/packages/release/bioc/html/edgeR.html
DESeq2	Love et al.46	https://bioconductor.org/packages/release/bioc/html/DESeq2.html
QTLtools	Delaneau et al.47	https://qtltools.github.io/qtltools/
missMDA	Josse and Husson31	http://factominer.free.fr/missMDA/index.html
GTC2VCF	NA	https://github.com/freeseek/gtc2vcf