Table 2.
Gene Ontology (GO) significantly enriched terms for differentially expressed genes (DEGs) of EC vs NEC.
| ID | Term | Class | Ratio1 | pvalue | qvalue |
|---|---|---|---|---|---|
| GO:0044436 | thylakoid part | Cellular Component | 0.75 | 2.59E-08 | 2.14E-05 |
| GO:0034357 | photosynthetic membrane | Cellular Component | 0.76 | 8.65E-08 | 2.14E-05 |
| GO:0042651 | thylakoid membrane | Cellular Component | 0.76 | 8.65E-08 | 2.14E-05 |
| GO:0009579 | thylakoid | Cellular Component | 0.75 | 1.01E-07 | 2.14E-05 |
| GO:0055035 | plastid thylakoid membrane | Cellular Component | 0.74 | 1.94E-05 | 0.003308 |
| GO:0009535 | chloroplast thylakoid membrane | Cellular Component | 0.74 | 0.000032 | 0.004548 |
| GO:0015979 | photosynthesis | Biological Process | 0.77 | 1.08E-06 | 0.006112 |
| GO:0004601 | peroxidase activity | Molecular Function | 0.77 | 2.24E-05 | 0.019227 |
| GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | Molecular Function | 0.77 | 2.24E-05 | 0.019227 |
| GO:0031976 | plastid thylakoid | Cellular Component | 0.67 | 0.000161 | 0.019623 |
| GO:0009534 | chloroplast thylakoid | Cellular Component | 0.67 | 0.000242 | 0.025754 |
| GO:0016023 | cytoplasmic, membrane-bounded vesicle | Cellular Component | 0.62 | 0.000331 | 0.031355 |
1Ratio presents the ratio of the number of DEGs to the number of all annotated genes in the pathway.