Table 2.
Features of datasets used in OA signature example.
| Feature | GSE117999 | GSE143514 | GSE19060 | GSE29746 | GSE82107 | GSE98918 |
|---|---|---|---|---|---|---|
| OA samples | 12 | 5 | 5 | 11 | 10 | 12 |
| Healthy samples | 12 | 3 | 3 | 11 | 7 | 12 |
| Mean CCR6 OA | 13.0832 | 0.4914 | 3.6073 | 8.2111 | 3.4547 | 13.2728 |
| SD | 1.0046 | 0.089 | 0.1007 | 0.2236 | 0.1211 | 0.3484 |
| c.o.v | 0.0768 | 0.1811 | 0.0279 | 0.0272 | 0.0351 | 0.0262 |
| mean CLEC7A OA | 8.0407 | 13.177 | 4.0879 | 7.9584 | 8.3056 | 7.9595 |
| SD | 0.5727 | 10.1985 | 0.1294 | 0.0543 | 1.163 | 0.2572 |
| c.o.v | 0.0712 | 0.774 | 0.0317 | 0.0068 | 0.14 | 0.0323 |
| mean IL18 OA | 7.9868 | 22.6703 | 3.4045 | 8.5381 | 4.7233 | 8.1281 |
| SD | 0.3115 | 3.79 | 0.0946 | 0.348 | 0.4194 | 0.2498 |
| c.o.v | 0.039 | 0.1672 | 0.0278 | 0.0408 | 0.0888 | 0.0307 |
| mean SRSF2 OA | 11.9468 | 101.7188 | 10.9003 | 14.7229 | 7.2814 | 11.8503 |
| SD | 0.9364 | 10.4052 | 0.3949 | 0.2297 | 0.5771 | 0.3822 |
| c.o.v | 0.0784 | 0.1023 | 0.0362 | 0.0156 | 0.0793 | 0.0323 |
| mean CCR6 healthy | 13.3711 | 0.4989 | 3.6359 | 8.0667 | 3.5601 | 13.3441 |
| SD | 0.455 | 0.3481 | 0.0246 | 0.1585 | 0.1682 | 0.5972 |
| c.o.v | 0.034 | 0.6977 | 0.0068 | 0.0196 | 0.0472 | 0.0448 |
| mean CLEC7A healthy | 7.9932 | 22.4676 | 4.0984 | 7.9655 | 7.2286 | 7.6234 |
| SD | 0.4049 | 6.8424 | 0.1047 | 0.0443 | 1.7401 | 0.2268 |
| c.o.v | 0.0507 | 0.3045 | 0.0255 | 0.0056 | 0.2407 | 0.0298 |
| mean IL18 healthy | 8.0039 | 15.2815 | 3.3938 | 8.6473 | 4.0956 | 7.9297 |
| SD | 0.2509 | 8.8324 | 0.16 | 0.5676 | 0.2324 | 0.3027 |
| c.o.v | 0.0313 | 0.578 | 0.0471 | 0.0656 | 0.0567 | 0.0382 |
| mean SRSF2 healthy | 11.7984 | 121.4576 | 11.3332 | 15.0048 | 7.1326 | 12.2934 |
| SD | 0.4921 | 19.476 | 0.1832 | 0.9023 | 0.5038 | 0.5752 |
| c.o.v | 0.0417 | 0.1604 | 0.0162 | 0.0601 | 0.0706 | 0.0468 |
c.o.v = coefficient of variation, SD = standard deviation, OA = osteoarthritis.