Table 2.
Summary of the longitudinal human cytomegalovirus synthetic datasets used to test the accuracy of the haplotype reconstruction methods. Four synthetic datasets with three samples each were created for HCMV by mixing GenBank sequences for a total of twelve samples.
| HCMV | ||
|---|---|---|
| Set | Sample composition | Similarity between haplotypes (Percentage identity) |
| Two haplotypes Low similarity Three time points |
|
|
| Two haplotypes High similarity Three time points |
|
|
| Three haplotypes Low similarity Three time points |
|
|
| Three haplotypes High similarity Three time points |
|
|