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. 2022 Nov 21;13:1034811. doi: 10.3389/fmicb.2022.1034811

Table 1.

Metal choices of RNases H.

RNase H Substrate Metal preference Source
Mycobacterium smegmatis RNase HI RNA/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Richa Gupta et al. (2017)
Escherichia coli RNase HI RNA/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Uchiyama et al. (1994)
Shewanella sp. SIB1 RNase HII RNA/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Chon et al. (2006b)
Chlamydia pneumonia RNase HII RNA/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Pei et al. (2005)
Archaeoglobus fulgidus RNase HII RNA/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Chai et al. (2001)
Pyrococcus kodakaraensis KOD1 RNase HII RNA/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Haruki et al. (1998)
Aeropyrum pernix RNase HII RNA/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Hou et al. (2012a)
Bacillus subtilis RNase HII Dr4D/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Randall et al. (2018)
Dr1D/DNA graphic file with name fmicb-13-1034811-igr0001.jpg
Bacillus subtilis RNase HIII RNA/DNA graphic file with name fmicb-13-1034811-igr0001.jpg Randall et al. (2018)
Dr4D/DNA graphic file with name fmicb-13-1034811-igr0001.jpg
Dr1D/DNA graphic file with name fmicb-13-1034811-igr0001.jpg

The optimal metal cofactor is in red; edges represent different levels of activity dependent on metal ions. Dr1D/DNA is the substrate of dsDNA that contains a single ribonucleotide. Dr4D/DNA is dsDNA with four embedded ribonucleotides.