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. 2022 Dec 5;26(1):105726. doi: 10.1016/j.isci.2022.105726
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

CD3 BioLegend OKT3; Cat#317328; RRID: AB_2562907
CD4 BioLegend RM4-5; Cat#100526; RRID: AB_312727
CD19 BioLegend SJ25C1; Cat#363024; RRID: AB_2564253
CD16 BioLegend 3G8; Cat#302044; RRID: AB_2563802
CD14 BioLegend M5E2; Cat#301838; RRID: AB_2562909
IgG BD Biociences G18-145; Cat#555786; RRID: AB_396121
Goat F(ab')2 Anti-Mouse IgG(H + L), Human ads-AP Bioconcept Cat#1032-04; RRID: AB_2794320

Biological samples

Donors’ PBMCs This study
Donors’ sera This study

Chemicals, peptides, and recombinant proteins

R848 (Resiquimod) InvivoGen Cat#tlrl-r848-5
Recombinant human IL-2 ImmunoTools Cat#11340027
RBD, mouse Fc Tag Sino Biological Cat#40592-V05H
pNPP Sigma-Aldrich Cat#71768-25G
SARS-CoV-2 S2 The Native Antigen Company Cat#REC31807-500
SARS-CoV-2 S1 The Native Antigen Company Cat#40150-V08B1
SARS-CoV-2 N The Native Antigen Company Cat#REC31812
HCoV-OC43 N The Native Antigen Company Cat#REC31857
SARS-CoV-2 NTD McCallum et al.13
SARS-CoV-2 S Walls et al.28,47
SARS-CoV S Walls et al.48
HCoV-OC43 S Pinto et al.49
MERS-CoV S Walls et al.48
HCoV-HKU1 S Pinto et al.49
SARS-CoV-2 RBD Piccoli et al.29
BM48-31/BGR/2008 RBD This study
Pangolin GX RBD This study
ZC45 RBD This study
SARS-CoV RBD This study
Beta RBD This study
Delta RBD This study
Omicron BA.1 RBD This study
Omicron BA.2 RBD This study
Omicron BA.3 RBD This study
Omicron BA.4/5 RBD This study
Human ACE2 Piccoli et al.29
Blocker™ Casein in PBS Thermo Fisher Scientific Cat#37528
Tween 20 Sigma Aldrich Cat#93773-1KG
Goat Anti-Human IgG-AP Bioconcept Cat#2040-04; RRID: AB_2795643
Sodium thiocyanate Sigma-Aldrich Cat#251410-2.5KG
Zombie Aqua Fixable Viability Kit BioLegend Cat#423101
Ficoll-Paque PLUS (6 x500ml) VWR International Cat#17-1440-03
RPMI-1640 W/O L-Glutamine (10x500ml) Life Technologies Europe BV Cat#31870074
HyClone Fetal Bovine Serum, US Origin 500ml, VWR International Cat#SH30070.03
DPBS w/o Ca and Mg (500ml), Chemie Brunschwig Cat#P04-36500 Pan Biotech
MEM NEAA Solution 100x, 100ml, Bioconcept Cat#5-13K00-H
Stable Glutamine solution (L-Ala/L-Gln)100x, 100ml Bioconcept Cat#5-10K50-H
Penicillin-Streptomycin Bioconcept Cat#4-01F00-H
Kanamycin (5,000ug/ml), 100ml Bioconcept Cat#4-08F00-H
Transferrin (Holo) from human serum LuBioscience Cat#0905-100
2-Mercaptoethanol 50MM Bioconcept Cat#5-69F00-E
Sodium Pyruvate (100mM, 100 ml) Bioconcep Cat#5-60F00-H

Experimental models: Cell lines

FreeStyleTM 293-F Cells ThermoFisher Scientific Cat# R79007; RRID: CVCL_D603
Expi293FTM Cells ThermoFisher Scientific Cat# A14527; RRID: CVCL_D615
ExpiCHO-STM ThermoFisher Scientific Cat# A29127; RRID: CVCL_5J31

Recombinant DNA

SARS-CoV-2 NTD pCMV plasmid McCallum et al.13
SARS-CoV-2 S phCMV1 plasmid Walls et al. and Starr et al.28,47
SARS-CoV S phCMV1 plasmid Walls et al.48
HCoV-OC43 S phCMV1 plasmid Pinto et al.49
MERS-CoV S phCMV1 plasmid Walls et al.48
HCoV-HKU1 S phCMV1 plasmid Pinto et al.49
SARS-CoV-2 RBD phCMV1 plasmid Piccoli et al.29
BM48-31/BGR/2008 RBD phCMV1 plasmid This study
Pangolin GX RBD phCMV1 plasmid This study
ZC45 RBD phCMV1 plasmid This study
SARS-CoV RBD phCMV1 plasmid This study
Beta RBD phCMV1 plasmid This study
Delta RBD phCMV1 plasmid This study
Omicron BA.1 RBD phCMV1 plasmid This study
Omicron BA.2 RBD phCMV1 plasmid This study
Omicron BA.3 RBD phCMV1 plasmid This study
Omicron BA.4/5 RBD phCMV1 plasmid This study
Human ACE2 phCMV1 plasmid Piccoli et al.29

Software and algorithms

Flowjo (v10.7.1) FlowJo https://www.flowjo.com
GraphPad Prism (v9.3.1) GraphPad https://www.graphpad.com
Everest (v3.0) Bio-Rad https://www.bio-rad.com
Microsoft Excel for Microsoft 365 MSO (Version 2204 Build 16.0.15128.20240) Microsoft https://www.microsoft.com