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. 2022 Nov 17;30:596–605. doi: 10.1016/j.omtn.2022.11.012

Table 2.

Differentially methylated regions in leukocyte DNA between HPV(+) and HPV(−) OPSCC patients

Chromosome Gene Discovery
Internal validation
External validation
Δβ valuea p value Δβ valuea p value Δβ valuea p value
Chr5 Nc886 0.130 0.003 0.100 0.001 0.046 0.042
Chr11 CAT −0.091 0.006 −0.033 0.020 −0.012 0.020
Chr12 GLIPR1L2 −0.120 0.010 −0.062 0.009 0.008 0.321
Chr6 PTCHD4 −0.054 0.049 −0.034 0.032 −0.002 0.759
a

Δβ value is the difference of the mean β of all the CpG sites in the DMR between HPV(+) and HPV(−) patients.