Table 2.
Chromosome | Gene | Discovery |
Internal validation |
External validation |
|||
---|---|---|---|---|---|---|---|
Δβ valuea | p value | Δβ valuea | p value | Δβ valuea | p value | ||
Chr5 | Nc886 | 0.130 | 0.003 | 0.100 | 0.001 | 0.046 | 0.042 |
Chr11 | CAT | −0.091 | 0.006 | −0.033 | 0.020 | −0.012 | 0.020 |
Chr12 | GLIPR1L2 | −0.120 | 0.010 | −0.062 | 0.009 | 0.008 | 0.321 |
Chr6 | PTCHD4 | −0.054 | 0.049 | −0.034 | 0.032 | −0.002 | 0.759 |
Δβ value is the difference of the mean β of all the CpG sites in the DMR between HPV(+) and HPV(−) patients.