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. Author manuscript; available in PMC: 2024 Jan 1.
Published in final edited form as: Biol Psychiatry. 2022 Jul 14;93(1):59–70. doi: 10.1016/j.biopsych.2022.06.034

Key Resource Table

Resource Type Specific Reagent or Resource Source or Reference Identifiers Additional Information
Add additional rows as needed for each resource type Include species and sex when applicable. Include name of manufacturer, company, repository, individual, or research lab. Include PMID or DOI for references; use “this paper” if new. Include catalog numbers, stock numbers, database IDs or accession numbers, and/or RRIDs. RRIDs are highly encouraged; search for RRIDs at https://scicrunch.org/resources. Include any additional information or notes if necessary.
Software; Algorithm BOLT-LMM https://doi.org/10.1038/ng.3190 https://alkesgroup.broadinstitute.org/BOLT-LMM/BOLT-LMM_manual.html#x1-20001
Software; Algorithm Genomic SEM https://doi.org/10.1038/s41562-019-0566-x https://github.com/GenomicSEM/GenomicSEM
Software; Algorithm FUMA/MAGMA https://doi.org/10.1038/s41467-017-01261-5 https://fuma.ctglab.nl/
Software; Algorithm Mplus version 8 https://www.statmodel.com/download/usersguide/Mplus%20user%20guide%20Ver_7_r6_web.pdf http://www.statmodel.com/
Software; Algorithm LD Score Regression https://doi.org/10.1038/ng.3211 https://github.com/bulik/ldsc
Software; Algorithm mtCOJO https://doi.org/10.1038/s41467-017-02317-2 https://yanglab.westlake.edu.cn/software/gcta/#Overview
Software; Algorithm Plink https://doi.org/10.1086/519795 http://pngu.mgh.harvard.edu/purcell/plink/
Software; Algorithm PrediXcan https://doi.org/10.1038/ng.3367 https://github.com/hakyimlab/PrediXcan
Software; Algorithm SBLUP https://doi.org/10.1016/j.ajhg.2010.11.011 https://yanglab.westlake.edu.cn/software/gcta/#SBLUP
Software; Algorithm LD Hub https://doi.org/10.1093/bioinformatics/btw613 http://www.nealelab.is/tools-and-software