Fig. 1. Gut microbiome profiles throughout the first year of life.
a Workflow representation of DNA and LPS isolation from faecal samples for metagenomic, immune and functional AMR analyses. b Relative abundances of metagenomic operational taxonomic units (mOTUs) >1% abundance at day 5 after birth, 1 month, 6 months, and at 1 year of age. c Canonical correlation analyses (CCA) resolving the stratification of taxonomic profiles based on two covariates, i.e. birth mode and time when samples were sequenced.