Table 1.
Statistics of the assembled ‘Shine Muscat’ genome and gene sequences
| Sequence name | Unphased genome | Phased genome | Gene | |
|---|---|---|---|---|
| VSMuph_r2.0. | VSMuph_r2.0. | VSMph_r1.0 | VSMuph_r2.0.1 | |
| All sequences | chr01-19 | |||
| Number of sequences | 4,595 | 19 | 15,650 | 32,827 |
| Total length (bp) | 488,971,633 | 462,883,708 | 1,004,717,561 | 41,873,115 |
| N50 length (bp) | 23,937,529 | 23,937,529 | 4,205,710 | 1,276 |
| Max length (bp) | 35,651,361 | 35,651,361 | 46,730,467 | 17,916 |
| Gaps (%) | 3.57 | 3.48 | 3.91 | 0.01 |
| GC (%) | 35.3 | 35.2 | 35.2 | 45.0 |
| BUSCOs (%) v3, obd10 | ||||
| Complete | 95.3 | 95.0 | 96.3 | 88.9 |
| Complete single copy | 93.6 | 93.4 | 21.2 | 86.1 |
| Complete duplicated | 1.7 | 1.5 | 75.1 | 2.8 |
| Fragmented | 1.4 | 1.3 | 1.0 | 5.6 |
| Missing | 3.3 | 3.7 | 2.8 | 5.5 |