Table 2.
Frequency of 13 KASP marker genotypes segregating for CMD, DMC and TCC in Uganda’s cassava breeding population.
| Trait | Marker | N | Hom1 | Het | Hom2 | %Hom1 | %Het | %Hom2 | % Null |
|---|---|---|---|---|---|---|---|---|---|
| CMD | S12_7926132 | 1,024 | GG | TG | TT | 19.9 | 59.3 | 20.2 | 0.6 |
| CMD | S12_7926163 | 1,024 | AA | GA | GG | 19.9 | 59.5 | 20.5 | 0.1 |
| CMD | S14_4626854 | 1,024 | AA | AG | GG | 14.9 | 56.1 | 28.7 | 0.3 |
| DMC | S1_24197219 | 653 | TT | TC | CC | 46.5 | 28.3 | 7.0 | 0.2 |
| DMC | S6_20589894 | 653 | GG | GA | AA | 30.2 | 52.5 | 16.7 | 0.6 |
| DMC | S12_5524524 | 653 | CC | CT | TT | 8.1 | 49.3 | 42.1 | 0.5 |
| DMC | S15_1012346 | 653 | CC | CT | TT | 16.7 | 51.1 | 16.7 | 15.5 |
| TCC | PSY2_572 | 653 | AA | CA | CC | 61.1 | 29.9 | 8.3 | 0.8 |
| TCC | S1_24636113 | 653 | GG | GA | AA | 55.3 | 32.5 | 9.8 | 2.5 |
| TCC | S1_30543962 | 653 | GG | GA | AA | 19.9 | 47.3 | 30.5 | 2.3 |
| TCC | S5_3387558 | 653 | TT | TC | CC | 0.6 | 75.8 | 23.1 | 0.5 |
| TCC | S8_25598183 | 653 | TT | TG | GG | 70.8 | 27.6 | 1.1 | 0.6 |
| TCC | S15_7659426 | 653 | GG | GT | TT | 49.3 | 44.1 | 6.4 | 0.2 |
Hom1, homozygous for minor allele; Het, heterozygote; Hom2, homozygous for major allele; Null, uncallable genotypes.