Table 5.
GWAS identified SNPs Associated with lp (a) Level.
| SNP | chr | pos | gene | EA | OA | MAF | log_OR | SE | P | N_Samples |
|---|---|---|---|---|---|---|---|---|---|---|
| rs1018234 | 6 | 160000000 | SLC22A3 | T | C | 0.38 | -0.046 | 0.019 | 1.600E-02 | 1256 |
| rs1406888 | 6 | 161000000 | – | T | C | 0.54 | 0.050 | 0.018 | 5.627E-03 | 1256 |
| rs2048327 | 6 | 160000000 | SLC22A3 | C | T | 0.45 | 0.046 | 0.018 | 1.300E-02 | 1256 |
| rs41269133 | 6 | 161000000 | SLC22A3 | C | T | 0.23 | -0.235 | 0.021 | 2.920E-28 | 1256 |
| rs429358 | 19 | 44908684 | APOE | C | T | 0.08 | -0.084 | 0.033 | 1.200E-02 | 1256 |
| rs520829 | 6 | 160000000 | SLC22A3 | G | T | 0.32 | -0.051 | 0.020 | 9.000E-03 | 1256 |
| rs56393506 | 6 | 161000000 | – | T | C | 0.18 | 0.309 | 0.022 | 9.080E-41 | 1256 |
| rs5930 | 19 | 11113589 | LDLR | A | G | 0.37 | -0.036 | 0.019 | 6.100E-02 | 1256 |
| rs6415084 | 6 | 161000000 | LPA | T | C | 0.17 | 0.272 | 0.023 | 3.510E-30 | 1256 |
| rs641990 | 6 | 160000000 | SLC22A3 | A | G | 0.39 | -0.033 | 0.019 | 8.600E-02 | 1256 |
| rs7412 | 19 | 44908822 | APOE | T | C | 0.08 | -0.062 | 0.035 | 7.400E-02 | 1256 |
| rs7765781 | 6 | 161000000 | LPA | C | G | 0.40 | -0.180 | 0.017 | 5.450E-24 | 1256 |
| rs7770628 | 6 | 161000000 | LPA | C | T | 0.18 | 0.304 | 0.022 | 5.090E-40 | 1256 |
SNP, single nucleotide polymorphism; EA, effect allele; OA, other allele; MAF, minor allele frequency; SE, standard error.
Adjusted for age and gender.