Table 1.
Information statistics of cyclophilin family members in apple (M. domestica)
| Gene Name | Accession Number | Chromosomal Location | CDS(bp) | Protein(aa) | pI | MW(kD) | Ii | Ai | GRAVY | Subcellular localization prediction |
|---|---|---|---|---|---|---|---|---|---|---|
| MdCYP1 | MD01G1152800 | Chr1:26117518..26119871 | 678 | 225 | 6.53 | 24.48195 | 25.59 | 82.67 | −0.136 | vacuole |
| MdCYP2 | MD02G1185800 | Chr2:16878399..16882986 | 1788 | 595 | 7.97 | 65.17845 | 36.59 | 68.72 | −0.53 | nucleus |
| MdCYP3 | MD02G1201300 | Chr2:19895874..19897921 | 483 | 160 | 7.77 | 17.37477 | 15.84 | 78.69 | −0.224 | cytoplasmskeleton |
| MdCYP4 | MD03G1070100 | Chr3:5724914..5727412 | 615 | 204 | 9.15 | 21.85521 | 8.4 | 81.18 | −0.121 | extracellular |
| MdCYP5 | MD03G1138000 | Chr3:14095422..14104165 | 1911 | 636 | 6.23 | 71.58536 | 42.57 | 76.57 | −0.448 | nucleus |
| MdCYP6 | MD03G1257000 | Chr3:34422870..34433514 | 2100 | 699 | 11.1 | 78.74325 | 90.2 | 40.56 | −1.476 | nucleus |
| MdCYP7 | MD04G1228500 | Chr4:30894118..30895418 | 486 | 161 | 6.89 | 17.20053 | 10.43 | 61.12 | −0.304 | cytoplasm |
| MdCYP8 | MD05G1075200 | Chr5:16012977..16017802 | 1089 | 362 | 5.7 | 40.24664 | 21.81 | 73.29 | −0.523 | cytoplasm |
| MdCYP9 | MD05G1119400 | Chr5:24114220..24117701 | 675 | 224 | 7.11 | 24.88356 | 32.64 | 91.65 | −0.096 | chloroplast |
| MdCYP10 | MD05G1222400 | Chr5:35494362..35501420 | 1926 | 641 | 5.84 | 74.00101 | 50.29 | 56.61 | −1.266 | nucleus |
| MdCYP11 | MD07G1046700 | Chr7:3974977..3978052 | 576 | 191 | 8.15 | 20.58666 | 23.67 | 74.55 | −0.129 | chloroplast |
| MdCYP12 | MD07G1221700 | Chr7:29879243..29881526 | 681 | 226 | 8.59 | 24.48718 | 20.94 | 87.88 | −0.108 | vacuole |
| MdCYP13 | MD08G1066000 | Chr8:5279500..5281237 | 813 | 270 | 7.1 | 30.13709 | 32.03 | 73.59 | −0.658 | nucleus |
| MdCYP14 | MD08G1145000 | Chr8:14409053..14416828 | 2556 | 851 | 11.58 | 95.73674 | 122.02 | 42.35 | −1.381 | nucleus |
| MdCYP15 | MD10G1123000 | Chr10:20043401..20046958 | 675 | 224 | 6.71 | 24.81751 | 28.51 | 90.36 | −0.083 | cytoplasm |
| MdCYP16 | MD10G1204000 | Chr10:30303123..30316243 | 1887 | 628 | 5.96 | 72.36817 | 45.88 | 54.67 | −1.278 | nucleus |
| MdCYP17 | MD11G1073900 | Chr11:6253081..6255477 | 615 | 204 | 8.99 | 21.79312 | 9.48 | 84.56 | −0.082 | vacuole |
| MdCYP18 | MD11G1160100 | Chr11:15695667..15713322 | 1896 | 631 | 6.2 | 71.09686 | 42.47 | 76.88 | −0.439 | cytoplasm |
| MdCYP19 | MD11G1277600 | Chr11:39477241..39482269 | 2034 | 677 | 10.99 | 75.46333 | 78.99 | 38.15 | −1.467 | nucleus |
| MdCYP20 | MD12G1030900 | Chr12:3429752..3432621 | 495 | 164 | 8.43 | 18.1676 | 26.98 | 70.73 | −0.463 | cytoplasm |
| MdCYP21 | MD13G1074200 | Chr13:5239114..5242164 | 732 | 243 | 7.76 | 27.33819 | 46.24 | 73.42 | −0.272 | chloroplast |
| MdCYP22 | MD13G1123100 | Chr13:9128856..9131629 | 780 | 259 | 9.41 | 27.43002 | 36.22 | 74.83 | −0.186 | chloroplast |
| MdCYP23 | MD14G1031400 | Chr14:2806135..2809153 | 495 | 164 | 8.76 | 18.13363 | 23.57 | 72.5 | −0.457 | cytoplasm |
| MdCYP24 | MD15G1055400 | Chr15:3743782..3747204 | 1494 | 497 | 7.69 | 56.24827 | 41.69 | 70.8 | −0.969 | cytoplasm |
| MdCYP25 | MD15G1120600 | Chr15:8676138..8681402 | 1305 | 434 | 9.54 | 48.91945 | 64.26 | 53.89 | −1.148 | nucleus |
| MdCYP26 | MD15G1280000 | Chr15:24899719..24902902 | 1088 | 361 | 6.18 | 40.82252 | 26.4 | 78.59 | −0.465 | cytoplasm |
| MdCYP27 | MD15G1307700 | Chr15:30716881..30721816 | 1785 | 594 | 8.24 | 64.79805 | 33.96 | 69.16 | −0.486 | nucleus |
| MdCYP28 | MD16G1075600 | Chr16:5293404..5295993 | 726 | 241 | 7.01 | 26.91272 | 48.35 | 75.27 | −0.259 | cytoplasm |
| MdCYP29 | MD16G1123800 | Chr16:8946852..8949641 | 780 | 259 | 9.54 | 27.53619 | 33.7 | 77.84 | −0.173 | chloroplast |
| MdCYP30 | MD17G1286000 | Chr17:34515787..34518173 | 762 | 253 | 8.52 | 27.86199 | 45.62 | 78.93 | −0.094 | chloroplast |
pI Theoretical Isoelectric point, MW Molecular weight, Ii Instability Index, Ai Aliphatic index, GRAVY Grand average of hydropathicity