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. 2020 Sep 14;30(11):1640–1650. doi: 10.4014/jmb.2006.06034

Fig. 4. LEfSe analysis of different abundance levels.

Fig. 4

(A) Histogram of LDA scores for different abundance levels. LDA scores represent the effect size of each abundance level. Levels enriched in each group with an LDA score >2 are considered. (B) Taxonomic relative abundant box plot of Proteobacteria. LDA score was calculated using LEfSe, a metagenome analysis approach. Abbreviations of group names are as follows: Sham, sham control; ETBF/AOM/DSS, ETBF colonized AOM/DSS; ETBF/AOM/DSS + Z(60), ETBF colonized AOM/DSS given zerumbone (60 mg kg-1); Z (60), zerumbone (60 mg kg-1).