Table 2.
Selection of Acetobacter genomes used in the OrthoFinder analysis.
| Strain of Acetobacter species | NCBI assembly level | NCBI RefSeq identifier |
|---|---|---|
| Acetobacter aceti TMW2.1153 | Complete genome | GCF_002005445.1_ASM200544v1 |
| Acetobacter aceti NBRC 14818T | Contig | GCF_004341595.1_ASM434159v1 |
| Acetobacter ascendens LMG 1590T | Complete genome | GCF_001766235.1_ASM176623v1 |
| Acetobacter cerevisiae LMG 1625T | Contig | GCF_001580535.1_ASM158053v1 |
| Acetobacter cerevisiae LMG 1545 | Contig | GCF_001581105.1_ASM158110v1 |
| Acetobacter cibinongensis 4H-1T | Contig | GCF_000963925.1_ASM96392v1 |
| Acetobacter fabarum KR | Contig | GCF_002276555.1_ASM227655v1 |
| Acetobacter ghanensis LMG 23848T | Chromosome | GCF_001499675.1_Acetobacter_ghanensis |
| Acetobacter indonesiensis 5H-1T | Scaffold | GCF_000963945.1_ASM96394v1 |
| Acetobacter malorum CECT 7742 | Scaffold | GCF_001642635.1_ASM164263v1 |
| Acetobacter malorum LMG 1746T | Contig | GCF_001580615.1_ASM158061v1 |
| Acetobacter nitrogenifigens DSM 23921T | Scaffold | GCF_000429165.1_ASM42916v1 |
| Acetobacter okinawensis JCM 25146T | Contig | GCF_000613865.1_ASM61386v1 |
| Acetobacter orientalis 21F-2T | Scaffold | GCF_000963965.1_ASM96396v1 |
| Acetobacter orleanensis CCM 3610 | Scaffold | GCF_002358055.1_ASM235805v1 |
| Acetobacter orleanensis JCM 7639T | Scaffold | GCF_000964205.1_ASM96420v1 |
| Acetobacter oryzifermentans SLV-7T | Complete genome | GCF_001628715.1_ASM162871v1 |
| Acetobacter papayae JCM 25143T | Contig | GCF_000613285.1_ASM61328v1 |
| Acetobacter pasteurianus Ab3 | Complete genome | GCF_001183745.1_ASM118374v1 |
| Acetobacter pasteurianus 386B | Complete genome | GCF_000723785.2_AP1 |
| Acetobacter pasteurianus subsp. pasteurianus LMG 1262T | Scaffold | GCF_000285275.1_ASM28527v1 |
| Acetobacter persici TMW2.1084 | Complete genome | GCF_002006565.1_ASM200656v1 |
| Acetobacter persici JCM 25330T | Contig | GCF_000613905.1_ASM61390v1 |
| Acetobacter pomorum BDGP5 | Complete genome | GCF_002456135.1_ASM245613v1 |
| Acetobacter senegalensis 108B | Complete genome | GCF_001499615.1_Acetobacter_senegalensis_108B |
| Acetobacter senegalensis LMG 23690T | Contig | GCF_001580995.1_ASM158099v1 |
| Acetobacter sp. B6 | Contig | GCF_004014775.1_ASM401477v1 |
| Acetobacter sp. BCRC 14118 | Contig | GCF_003332175.1_ASM333217v1 |
| Acetobacter sp. DmW_043 | Contig | GCF_002153485.1_ASM215348v1 |
| Acetobacter sp. DsW_059 | Contig | GCF_002153695.1_ASM215369v1 |
| Acetobacter sp. DsW_063 | Contig | GCF_002153745.1_ASM215374v1 |
| Acetobacter sp. DsW_54 | Contig | GCF_002153575.1_ASM215357v1 |
| Acetobacter sp. JWB | Complete genome | GCF_003323795.1_ASM332379v1 |
| Acetobacter syzygii 9H-2T | Scaffold | GCF_000964225.1_ASM96422v1 |
| Acetobacter tropicalis NBRC 16470T | Scaffold | GCF_000787635.2_ASM78763v2 |
| Acetobacter tropicalis BDGP1 | Complete genome | GCF_002549835.1_ASM254983v1 |