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. 2022 Nov 24;13:1059493. doi: 10.3389/fpls.2022.1059493

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Copyright © 2022 Sano, Malabarba, Chen, Gaillard, Windels and Verdier

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Differences in chromatin accessibility of genes belonging to each cluster among R1, R1P and R5. (A) TSS enrichment scores from ATAC-seq were plotted at ±3 Kb of the transcription start site (TSS) of genes in each cluster. (B) Violin plots showing normalized read density of genes (1 Kb promoter + mRNA) in each cluster at R1, R1P and R5. Dashed lines represent the mean value for each sample. Different letters indicate significant differences (*P < 0.01, Steel–Dwass test).