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. 2022 Nov 24;13:1059493. doi: 10.3389/fpls.2022.1059493

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Copyright © 2022 Sano, Malabarba, Chen, Gaillard, Windels and Verdier

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Identification of genes in differentially accessible chromatin regions (DARs) between DT and DS germinating radicles. (A) Number of genes (1 Kb promoter + mRNA) present in DARs between DS (R1&R5) and DT (R1P) samples (adjusted P < 0.05; Benjamini–Hochberg method). (B) Venn diagrams show overlaps between genes in DT-DARs detected by ATAC-seq and genes belonging to cluster 1 detected by RNA-seq. Asterisks indicate significant overlap (P values from Fisher’s exact test; OR: odds ratio which represents the strength of association, with OR>1 corresponding to a strong association).