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. 2022 Nov 15;3(11):100818. doi: 10.1016/j.xcrm.2022.100818
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse Anti-Human IgG Fc-PE (JDC-10) SouthernBiotech Cat# 9040-09; RRID:AB_2796601
PE Goat anti-mouse IgG Antibody (Clone Poly4053) Biolegend Cat# 405307; RRID:AB_315010
Mouse Anti-Human IgG1 Fc-PE (HP6001) SouthernBiotech Cat# 9054-09; RRID:AB_2796628
Mouse Anti-Human IgG2 Fc-PE (HP6002) SouthernBiotech Cat# 9070-09; RRID:AB_2796639
Goat Anti-Mouse IgG3, Human ads-AP SouthernBiotech Cat# 1100-09; RRID:AB_2794576
Mouse Anti-Human IgG4 Fc-PE (HP6025) SouthernBiotech Cat# 9200-09; RRID:AB_2796693

Biological samples

Human serum from anti-A2 sensitized patients Hôpital Erasme ULB, Brussels, Belgium N/A
Polyclonal immunoglobulin G (from Normal Human Plasma) Athens Research & Technology Cat#16-16-090707

Chemicals, peptides, and recombinant proteins

Protein A
Protein G
2-Deoxy-2-fluoro-L-fucose Carbosynth Cat# MD06089
HLA-A2 NIH Tetramer Facility
HLA-A1 NIH Tetramer Facility
HSV-gD (Ectodomain) Immune Technology Cat# IT-005-055p
Albumin, Bovine Fraction V (BSA) RPI Cat# A30075-250.0
Tween 20 Sigma Aldrich Cat# P9416-100ML
Streptavidin Magnetic Beads NEB Cat# S1420S
Streptavidin-R-Phycoerythrin Agilent Cat# PJ31S- 1
NeutrAvidin ThermoFisher Scientific Cat# 31000
QUANTI-Luc Invivogen Cat# rep-qlc2
eBioscience™ Cell Stimulation Cocktail (500X) ThermoFisher Scientific Cat# 00-4970-93
LIVE/DEAD™ Fixable Violet Dead Cell Stain Kit, for 405 nm excitation ThermoFisher Scientific Cat# L34964
Electron Microscopy Sciences 16% Paraformaldehyde Aqueous Solution, EM Grade, Bottle 100 ML Fisher Scientific Cat# 15710
FcγRIIIa V158 In house (Boesch et al. 2014)104 N/A
FcγRI In house (Boesch et al. 2014)104 N/A
Melon™ Gel IgG Spin Purification Kit ThermoFisher Scientific Cat# 45206
Chromabond C18ec beads Macherey-Nagel Cat#30611
Sequencing Grade Modified Trypsin Promega Cat#V511A
Protein G Sepharose® 4 Fast Flow beads GE Healthcare Cat#17-0618-05
Formic Acid Sigma-Aldrich Cat#94318; CAS: 64-18-6
Acetonitrile (LC-MS grade) Biosolve Cat#012078; CAS: 75-05-8
Trifluoroacetic Acid (LC-MS grade) Merck Cat#85183; CAS: 76-05-1
Ammonium Bicarbonate Sigma-Aldrich Cat#09830; CAS: 1066-33-7

Critical commercial assays

QUANTI-Luc Lucia luciferase reporter gene system invivogen rep-qlc2
RNeasy kit Qiagen Cat# 74104

Deposited data

Liquid chromatography - Mass spectrometry data This paper https://doi.org/10.25345/C5Q52FJ02 (Accession code: MSV000090430)

Experimental models: Cell lines

Mouse HLA-A2 hybridoma cells ATCC HB-82 BB7.2
HEK-expi293 cells
Jurkat Lucia NFAT-CD16 cells Invivogen Cat# jktl-nfat-cd16
A375 cells ATCC CRL-1619
NK-92 human NK cells NantKwest/ImmunityBio https://immunitybio.com/

Recombinant DNA

pCMV-M1 Addgene Cat# 23007

Software and algorithms

Flowjo v10 Flowjo https://www.flowjo.com/
Prism GraphPad https://www.graphpad.com/
Bruker Compass DataAnalysis Bruker Daltonics https://www.bruker.com
MSConvertGUI ProteoWizard https://proteowizard.sourceforge.io
LaCyTools LaCyTools (Jansen et al. 2016)105 https://git.lumc.nl/cpm/lacytools
BioRender BioRender https://biorender.com
Microsoft Office Excel and PowerPoint Microsoft https://microsoft.com

Other

96-well EIA/RIA clear flat bottom polystyrene high bind microplate Corning Cat# 3361
96 well clear bottom sterile tissue culture treated plates with lid Thomas Scientific Cat# 6916A05
Suspension culture microplate, 96 well, PS, U-bottom, with lid, sterile, single packed Grenier bio-one Cat# 650185
USA Scientific Inc 96-well PlateOne PP V-bottom plate, non-sterile Fisher Scientific Cat# 18339600
Octet® High Precision Streptavidin 2.0 (SAX2) Biosensors Sartorius Cat# 18-5136