TABLE 3.
Comparison of the locations of the BACs in chromosome-scale assemblies of Zalophus californianus compared to the FISH analysis
| Assembly version | SRassembly. v2 |
SRassembly. v3 |
VGPassembly |
|---|---|---|---|
| Total BACs lifted | 204 | 202 | 205 |
| BACs deleted in assembly | 1 | 1 | 1 |
| BACs split in assembly | 9 | 9 | 9 |
| BACs partial in assembly | 24 | 26 | 23 |
| Assembled on another chromosome | 6 | 5 | 5 |
| FISH centromere-assembly telomere | 3 | 1 | 1 |
| FISH telomere-moved to centromere | 0 | 0 | 0 |
| Location moved within chromosome arm | 5 | 3 | 3 |
Note: Congruence among assemblies probably suggests errors in cytogenetic inference or systematic errors common to all.