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. 2022 Dec 8;23:529. doi: 10.1186/s12859-022-05054-6

Fig. 4.

Fig. 4

PRRR is robust to rank misspecification. Using synthetic data generated from the PRRR model with a true rank of R=3, we fit PRRR with a range of rank specifications (x-axis). We made predictions for a held-out dataset and computed the R2 coefficient of determination, repeating this ten times for each rank. The y-axis shows the R2 value between the predicted values and the true values on held-out samples. Boxes show the median and upper and lower quartiles, and whiskers extend to 1.5 times the interquartile range. a Maximum a posteriori estimates (MAP); b Variational inference (VI); c Comparison with Gaussian RRR [48] and LASSO [51]