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. 2022 Nov 25;13:1062194. doi: 10.3389/fpls.2022.1062194

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Copyright © 2022 Muto, Bruno, Madeo, Ludlow, Ferrari, Stimpson, LoGiudice, Picardi, Ferrante, Pasti, Müller, Chiappetta, Rogers, Bitonti and Spadafora

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Expression profiling of time course transcriptome data using ImpulseDE2 (Fischer et al., 2018) to identify clusters of genes that are continuously up- or down-regulated MONOTONOUS INCREASE (MI) and DECREASE (MD) genes and transiently up- or down-regulated, TRANSIENT INCREASE (TI) and DECREASE (TD) (A); numbers of differentially expressed genes (DEGs) in the MI, MD, TI and TD clusters for SAG peach and BT nectarine (B).