TABLE 2.
Amino acid sequence homology of ORF proteins from A. hydrophila AH-3 and other proteins
| Protein, source | No. of amino acids | % Similaritya | % Identitya | Accession no. |
|---|---|---|---|---|
| ORF1 (helicase), Aeromonas hydrophila AH-3 | 690 | AF183931 | ||
| DING (probable ATP-dependent helicase) | ||||
| Escherichia coli | 716 | 54.3 | 34.0 | P27296 |
| Mycobacterium tuberculosis | 664 | 51.2 | 29.7 | Q10640 |
| Bacillus subtilis | 931 | 49.8 | 28.5 | P54394 |
| Yom1 (putative ATP-dependent helicase in OmpH 5′ region, Photobacterium sp. | 151 | 79.5 | 49.6 | P29741 |
| ORF2 (porin II), A. hydrophila AH-3 | 352 | AF183931 | ||
| PhoE, Enterobacter cloacae | 350 | 52.7 | 30.5 | Q47490 |
| OmpF, Serratia marcescens | 374 | 51.6 | 29.9 | O33980 |
| OmpN, E. coli | 377 | 51.4 | 29.8 | P77747 |
| OmpK37, Klebsiella pneumoniae | 374 | 50.4 | 29.2 | e1325636 |
| OmpL, Photobacterium sp. | 341 | 48.7 | 28.9 | Q52581 |
| ORF3 (AspC), A. hydrophila AH-3 | 396 | AF183931 | ||
| AspC (aspartate aminotransferase) | ||||
| E. coli | 396 | 92.4 | 63.6 | P00509 |
| Haemophilus influenzae | 396 | 88.6 | 60.8 | P44425 |
| Moraxella sp. | 397 | 67.8 | 49.7 | O53137 |
a
Obtained from pairwise comparisons using the Gap program (gap weight, 12; length weight, 12).