Table 1.
Minigene Name | Exon(s) | Properties | Application | Ref. |
---|---|---|---|---|
hTau | 1, 2, 4 | Exon 2 flanked by different length of its native introns, surrounded by E1 and E4 | Identification of cis and trans acting elements altering splicing of E2 | [132] |
SV1/2L/4 | 2 | Exon 2 flanked by its native exons | In situ mutagenesis to identify cis acting elements in the exon and downstream intron | [36] |
SP/2L | 2 | Exon 2 flanked by heterologous exons | In situ mutagenesis to identify cis acting elements in the exon and downstream intron | [36] |
SVΔ2/3 | 3 | E3, 1.1 kbps of I2 and 1.4 kpbs of I3 | E3 default splicing pattern analysis, identification of cis-acting elements | [37] |
pSVIRB SV6 | 6 | E6, 600 bps I5, 200 bps I6 | Exon-trapping assay | [40] |
TauEx9-11d5 | 9-10-11 | E10 flanked by 269 and 246 bp of its native intron and exons 9–11. | Identification of cis-acting elements altering splicing of E10 | [129] |
SI9/SI10 LI9/SI10 SI9/LI10 LI9/LI10 |
9-10-11 | E10 can be flanked by a long (L) or short (S) portion of the upstream and downstream intron | Identification of a required minimal distance for E10 splicing | [130] |
Tau minigene | 9-10-11 | Identification of HnRNPC as a novel trans-acting factor on E10 | [133] | |
RHCGlo Tau wt RHCGlo Tau Δ280K RHCGlo Tau N279K |
10 | Contains WT E10 or E10 with Δ280K, and N279K mutations | Identification of cis and trans-acting elements affecting E10 splicing | [128] |
Luc M14 | 10 | Luciferase reporter, modified from TauEx9-11 d5 minigene | Identification of compound that reduced exon 10 inclusion; identify cis/trans elements | [130,131,134,135] |