lncRNA |
long non-coding RNA |
lincRNA |
intergenic lncRNA |
lncNAT |
long non-coding natural antisense transcript |
miRNA |
microRNA |
ceRNA |
competing endogenous RNA |
ssRNA-seq |
strand-specific RNA sequencing |
AAT |
artificial aging treatment |
DEL |
differentially expressed lncRNA |
DEG |
differentially expressed mRNA |
RACE |
rapid-amplification of cDNA ends |
LTR |
long terminal repeated |
S50 |
aged seeds (50% germination percentage) |
S96 |
new seeds (96% germination percentage) |
ORF |
open reading frame |
FPKM |
fragments per kilobase of exons per million fragments mapped |
PFAM |
database of protein families |
CPC |
coding potential calculator |
KEGG |
Kyoto Encyclopedia of Genes and Genomes |
PCC |
pearson correlation coefficient |
GO |
Gene Ontology |
NER |
nucleotide excision repair |
qPCR |
Quantitative Real-time PCR |
KOBAS |
KEGG Orthology-Based Annotation System |
ROS |
reactive oxygen species |
ABA |
abscisic acid |
GA |
gibberellin |