Table 1.
QUAST (Quality Assessment Tool for Genome Assemblies) analysis for genome assembly report of the chloroplast genome of P. rubens with the chloroplast genomes of P. sitchensis, P. engelmannii, P. glauca, P. chihuahuana, P. neoveitchii, P. abies, P. asperata, P. crassifolia, P. jezoensis, and P. mariana as reference.
| Picea sitchensis | Picea engelmannii | Picea glauca | Picea chihuahuana | Picea neoveitchii | Picea abies | Picea asperata | Picea crassifolia | Picea jezoensis | Picea mariana | |
|---|---|---|---|---|---|---|---|---|---|---|
| Misassembled contigs length | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Local misassemblies | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 0 |
| Mismatches | 598 | 368 | 368 | 337 | 279 | 270 | 278 | 278 | 131 | 122 |
| Indels | 105 | 66 | 72 | 58 | 56 | 72 | 64 | 64 | 36 | 31 |
| Indels (<=5 bp) | 73 | 52 | 55 | 49 | 44 | 60 | 50 | 50 | 28 | 27 |
| Indels (>5 bp) | 32 | 14 | 17 | 9 | 12 | 12 | 14 | 14 | 8 | 4 |
| Indels length (bp) | 632 | 493 | 527 | 398 | 238 | 331 | 323 | 321 | 250 | 202 |