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. 2000 Apr;68(4):2205–2214. doi: 10.1128/iai.68.4.2205-2214.2000

TABLE 2.

PCR primers and templates for probe preparation and genomic sequence analysis

PCR product Size (bp) PCR primera
PCR template
Left Right
eibA probe 1,000 pr172 pr173 pCS6379
eibE probe 785 pr219 pr234 CH6249
eaaA probe 737 Standard vector Standard vector pDC6181
eaaC min 42.0b 1,250 pr196 pr197 CH6304
K-12 min 42.0b 989 pr221 pr197 K-12
a

Primer sequences were as follows: pr172, CTGTTTTGTCTGCGGCAATGGC; pr173, TTACCCACGCTGTACGGCTGGAAC; pr196, GGCCGTATGCTGATGTCTGTG; pr197, CCTGGGAACTTGGCTTTAATC; pr219, CTAGGACGGCAAAGTGTG; pr221, CGATGGCACCTGTCTATG; pr234, ACGCCCATGTTGTAGGAC. 

b

The primers for amplifying the insert end and chromosomal attachment site relative to eibC were based on the sequences of eaaC (pr196) and the bacterial yecN (pr221) and yecD (pr197) genes.