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. 2022 Aug;23(8):2623–2632. doi: 10.31557/APJCP.2022.23.8.2623

Table 4.

Interactions of the Native Ligand, Brazilein, and Brazilin on PI3Kα Protein

Compound Parameter PI3Kα (PDB ID: 3T8M)
Native ligand (3T8) Docking Score (kcal/mol) −14.69
RMSD (Å) 1.315
Ligand Atom O O H H C C
Amino Acid Ser806 Val882 Val882 Tyr867 Ile963 Met963
Binding Type H-bond H-bond H-bond Arene-H Arene-H Arene-H
Distance 1.52 2.04 1.69
Brazilein Docking Score (kcal/mol) −9.78
RMSD (Å) 0.879
Ligand Atom H C
Amino Acid Glu880 Ile963
Binding Type H-bond Arene-H
Distance 1.8
Brazilin Docking Score (kcal/mol) −10.02
RMSD (Å) 1.07
Ligand Atom H
Amino Acid Tyr867
Binding Type Arene-H
Distance