Deposited data: |
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Processed model data |
This paper |
https://doi.org/10.5061/dryad.sf7m0cg92
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Experimental Models: Organisms/Strains |
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Mouse: C57BL/6J |
Jackson Laboratories and bred in-house |
Strain code: 027 |
Software and Algorithms |
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Python 3.8 |
https://www.python.org/
|
RRID: SCR_008394 |
Open Ephys plugin-GUI |
http://www.open-ephys.org/
|
https://github.com/open-ephys/plugin-GUI
|
Bonsai |
https://open-ephys.org/bonsai
|
https://github.com/bonsai-rx/bonsai
|
DeepLabCut |
(Mathis et al. 2018) |
https://github.com/DeepLabCut/DeepLabCut
|
Kornia |
(Riba et al. 2019) |
https://github.com/kornia/kornia
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Data extraction and analysis code |
This paper |
https://doi.org/10.5281/zenodo.7008353
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PyTorch |
https://pytorch.org/
|
https://pytorch.org/
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Other |
|
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Open Ephys acquisition board |
Open Ephys |
https://open-ephys.org/acq-board
|
Open Ephys I/O board |
Open Ephys |
https://open-ephys.org/acquisition-system/io-board-pcb
|
P64-3 or P128-6 silicon probe |
Diagnostic Biochips |
https://diagnosticbiochips.com/silicon-acute-chronic/
|
RHD SPI interface cable, 6ft ultra-thin |
Intan |
https://intantech.com/RHD_SPI_cables.html?tabSelect=RHDSPIcables
|
3-D printed electrophysiology drive |
Yuta Senzai (UCSF) / in-house design |
custom |
3-D printed camera arm |
In-house design |
custom |
1000TVL NTSC miniature camera |
iSecurity101 |
No longer available |
BETAFPV C01 miniature camera |
BETAFPV |
https://betafpv.com/products/c01-pro-micro-camera
|
940nm 3mm IR LED |
Chanzon |
https://www.amazon.com/Infrared-Lighting-Electronics-Components-Emitting/dp/B01BVEKXNC/
|
Animal head tracking device |
Rosco Technologies |
https://www.rosco.tech/products/animal-tracking
|
Mill-Max connector 853-93-100-10-001000 |
Digi-Key |
https://www.digikey.com/en/products/detail/mill-max-manufacturing-corp/853-93-100-10-001000/279662
|
FEP hookup wire 36 AWG CZ1174 |
Cooner |
https://www.coonerwire.com/micro-bare-copper-wire/
|
USB3HDCAP USB3 video capture device |
Startech |
https://www.startech.com/en-us/audio-video-products/usb3hdcap
|
Dazzle DVD recorder HD |
Pinnacle |
https://www.pinnaclesys.com/en/products/dazzle/dvd-recorder-hd/
|
Black Fly S USB3 (BFS-U3-16S2M-CS) |
Teledyne FLIR |
https://www.flir.com/products/blackfly-s-usb3/?model=BFS-U3-16S2M-CS&vertical=machine+vision&segment=iis
|
GW2780 OLED monitor |
BenQ |
https://www.benq.com/en-us/monitor/stylish/gw2780.html
|
GW2480 OLED monitor |
BenQ |
https://www.benq.com/en-us/monitor/stylish/gw2480.html
|
Mouse bungee (Version 1) |
Razer |
https://www.razer.com/gaming-mice-accessories/Razer-Mouse-Bungee-V2/RC21-01210100-R3M1
|
Unifast LC |
GC America |
https://www.gcamerica.com/products/operatory/UNIFAST_LC/
|
DOWSIL 3-4680 silicone gel kit |
Dow |
https://www.dow.com/en-us/pdp.dowsil-3-4680-silicone-gel-kit.04027625z.html#overview
|