Skip to main content
. Author manuscript; available in PMC: 2022 Dec 13.
Published in final edited form as: Nat Methods. 2022 Mar 31;19(6):696–704. doi: 10.1038/s41592-022-01445-y

Extended Data Fig. 8 |. Phase block analysis of zebra finch pseudo-haploid assembly.

Extended Data Fig. 8 |

a, Phase blocks in the primary assembly after mapping the reads to both the primary and alternate assemblies. b, Phase blocks in the primary assembly after mapping the reads to both the primary only. c, Phase blocks in the alternate assembly after mapping the reads to both the primary and alternate assemblies. d, Phase blocks in the alternate assembly. In all cases, the application of Merfin filtering minor heterozygous variants (green) leads to block sizes better or comparable to prior polishing methods alone (blue). Unpolished assembly in gray. Results of Merfin without filtering in red. A genome size of ~1.03 Gbp derived from Genomescope2 was used to normalize NG* values.