. Author manuscript; available in PMC: 2022 Dec 13.

Published in final edited form as: J Mol Graph Model. 2021 Dec 21;111:108103. doi: 10.1016/j.jmgm.2021.108103

Table A.6.

List of the Protein Data Bank [17,18] structures used as queries for the track.

Domain name	Pfam ID	PDB code	chain	residues	Reference

SH2 domain	PF00017	1P13	B	161–243	[66,67]
SH3 domain	PF00018	1ABO	B	67–113	[68,69]
Variant SH3 domain (SH3_2)	PF07653	5O99	B	474–527	[70,71]
PDZ domain	PF00595	2HE2	B	421–499	[72,73]
PDZ_6 domain	PF17820	3KHF	B	982–1034	[74]
Peptidase family M50 (m50)	PF02163	3B4R	B	111–186	[75]
Bromodomain	PF00439	6CW0	B	10–95	[76]
PHD-finger domain	PF00628	3KV5	D	39–88	[77,78]
Zinc-finger domain, C2H2 type (zf-C2H2)	PF00096	4ISI	D	472–493	[79,80]
STAT protein, DNA-binding domain (Stat-binding)	PF02864	5D39	D	277–413	[81,82]