Table C.8.
Reciprocal rank for the shape-only dataset.
| Method | SH3 | SH3_2 | SH2 | PDZ | PDZ_6 | m50 | STAT | zf-C2H2 | PHD | Bromodomain | SH3-like | PDZ-like |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| ||||||||||||
| Class size | 115 | 33 | 92 | 128 | 26 | 4 | 6 | 55 | 53 | 64 | 148 | 154 |
| 3DZD | 0.143 | 0.033 | 1 | 1 | 0.030 | 0.002 | 0.021 | 1 | 1 | 1 | 1 | 1 |
| ProteinNet | 0.071 | 0.036 | 0.25 | 0.5 | 0.25 | 0.005 | 0.002 | 0.010 | 0.071 | 0.067 | 1 | 0.5 |
| APPFD | 0.5 | 0.042 | 0.1 | 1 | 0.2 | 0.01 | 0.022 | 1 | 1 | 0.167 | 0.333 | 1 |
| PWKSM | 0.333 | 0.053 | 0.125 | 1 | 0.333 | 0.015 | 0.042 | 0.083 | 0.042 | 0.333 | 0.333 | 1 |
| DGCNN | 0.333 | 0.083 | 0.167 | 0.5 | 0.333 | 0.037 | 0.006 | 0.042 | 0.1 | 0.333 | 0.25 | 0.5 |