Subject | Biological sciences |
Specific subject area | Cardiology and Cardiovascular Medicine Functional genetics Stem cell technology |
Type of data | Figure Video Excel |
How the data were acquired | Images and videos were recorded with the microscope. Expressional and genotyping data were acquired with qPCR and recorded in .xlsx format; analysed data were shown as graphs. Genomic locations were derived from the UCSC genome browser with the following link: https://genome.ucsc.edu. |
Data format | Raw Analysed |
Description of data collection | Human RNA and DNA samples for eQTL analyses were from patients undergoing cardiac surgeries collected in a previous project [1]. Human embryonic heart samples for in situ hybridisation were provided by the HDBR group. Functional experimental data were generated with in vitro human embryonic stem cell-cardiomyocytes differentiation model (hESC-CM) at D0, D2, D4, D6, D8, and D15. The control cells for experiments were transduced with CRISPR vector without targeting sgRNA sequences. |
Data source location | Institution: Division of Cardiovascular Sciences, University of Manchester City: Manchester Country: UK |
Data accessibility | Analysed data and figures are available in the article. Raw data of eQTL are available in “Raw data for STX18-AS1”, Mendeley Data, V1, doi: 10.17632/rpzs6fcdhz.1 Supplementary videos are in “Video supplements”, Mendeley Data, V1, doi: 10.17632/rw949cx3y8.1 |
Related research article | Yingjuan Liu, Mun-kit Choy, Sabu Abraham, Gennadiy Tenin, Graeme C. Black, Bernard D. Keavney. “Atrial Septal Defect (ASD) associated long noncoding RNA STX18-AS1 maintains time-course of in vitro cardiomyocyte differentiation” Genes and Diseases, DOI:10.1016/j.gendis.2022.07.010. |