TABLE 2.
Items,% | Control | C. Per | Cocc | Comb | SEM | P |
Firmicutes | 91.77 | 96.26 | 98.70 | 90.79 | 4.014 | 0.47 |
Proteobacteria | 2.74 | 2.67 | 0.62 | 8.43 | 3.867 | 0.53 |
Bacteroidetes | 3.07a | 0.16b | 0.37b | 0.18b | 0.760 | 0.03 |
Cyanobacteria | 1.25 | 0.27 | 0.02 | 0.0008 | 0.478 | 0.24 |
Actinobacteriota | 0.52 | 0.57 | 0.22 | 0.55 | 0.248 | 0.72 |
Verrucomicrobiota | 0.24 | 0.02 | 0.05 | 0.01 | 0.117 | 0.49 |
Campilobacterota | 0.21 | 0.015 | 0.007 | 9.58E-6 | 0.080 | 0.21 |
Fusobacteriota | 0.06 | 0.013 | 0.013 | 0.012 | 0.033 | 0.65 |
Desulfobacterota | 0.07a | 0.001ab | 0.002ab | 0b | 0.017 | 0.03 |
Synergistota | 0.016 | 0 | 0.004 | 0 | 0.008 | 0.49 |
Others | 0.06 | 0.02 | 1.11E-16 | 0.05 | 0.016 | 0.09 |
C. Per, C. perfringens challenge; Cocc, Eimeria challenge; Comb, C. perfringens and Eimeria challenge. Within a row, means without a common superscript (a, b) differ (P < 0.05).