Table 1.

GWAS analyses identified 16 SNP loci significantly associated with body weight in male and female yaks

CHR	Physical Position	SNP	P	FDR_BH	Allele A	Allele B	BETA	R2(%)
Male
scaffold2344_1	326,970	AX-174702570	1.80E-07	0.02	A	G	67.9	5.59
scaffold2344_1	327,739	AX-174961896	1.80E-07	0.02	T	G	67.9	5.59
scaffold2344_1	337,514	AX-174407967	1.80E-07	0.02	A	G	67.9	5.59
scaffold2344_1	337,544	AX-174402854	1.80E-07	0.02	A	G	67.9	5.59
scaffold4472_1	23,932	AX-174929694	1.43E-06	0.12	A	G	41.84	4.00
scaffold4472_1	82,966	AX-174547362	2.68E-06	0.20	A	G	45.29	5.25
scaffold2104_1	1,168,770	AX-174734142	4.97E-06	0.25	A	G	-48.47	7.40
scaffold2104_1	1,170,706	AX-174706158	4.97E-06	0.25	A	G	-48.47	7.40
scaffold4472_1	68,096	AX-174783962	5.82E-06	0.25	A	G	43.11	5.41
scaffold70_3	2,788,947	AX-174627015	5.98E-06	0.25	A	G	51.08	8.14
scaffold2021_1	491,659	AX-174928167	6.47E-06	0.25	T	C	49.71	0.27
scaffold699_1	549,280	AX-174555047	8.94E-06	0.32	T	G	-50.34	0.26
Female
scaffold10_1	223,744	AX-174845027	3.39E-06	0.56	A	G	-19.78	2.10
scaffold1366_1	539,922	AX-174891371	5.39E-06	0.56	T	C	68.75	0.87
scaffold1366_1	561,203	AX-174570649	5.56E-06	0.56	A	G	68.94	0.29
scaffold923_1	123,435	AX-174620133	9.60E-06	0.56	T	C	-19.78	2.72

FDR False discovery rate

R²: phenotypic variance explained (PVE) by the significant SNP