Table 1.

Per-residue root mean square fluctuation (RMSF) of the 3′-strand of the P1 helix in the apo1, apo2 and holo aptamer states after a 50 ns MD simulation

	Apo1	Apo2	Holo
P1 Helix Residue	RMSF (Å)	RMSF (Å)	RMSF (Å)
69	1.380	1.468	1.246
70	1.041	1.022	0.807
71	1.002	0.819	0.695
72	1.035	0.819	0.708
73	0.959	0.847	0.687
74	0.914	0.937	0.696
75	1.019	0.995	0.814
76	1.446	1.337	0.121