Table 1.
Primers
Murine Tgfbr3l promoter amplification | |
5′ RACE gene-specific RT primer | GGACGGACGAGGTATTGTGA |
5′ RACE gene-specific outer R | CCTGCGTCCGGTATTCAATG |
5′ RACE gene-specific inner R | GGGCGTGAAGAAGGTGTTAC |
−999/+1 promoter amplification F | AAAACTCGAGGTAGCTGATGCAACCATACGTAG |
−999/+1 promoter amplification R | AAAAAAGCTTGACCGGCAGCGAGCACCT |
Human TGFBR3L promoter amplification | |
−996/+1 promoter amplification F | AAAACTCGAGTAGGCGTAGCATCCCTCTC |
−996/+1 promoter amplification R | TTTTAAGCTTGGACCAGCTGAGGTCGGA |
Tgfbr3l/TGFBR3L mutagenesis | |
Tgfbr3l SF-1 site 1 mut F | ATCTGAGCACATGCTCAATTCCAGCCATGGATAAGGGC |
Tgfbr3l SF-1 site 1 mut R | GCCCTTATCCATGGCTGGAATTGAGCATGTGCTCAGAT |
Tgfbr3l SF-1 site 2 mut F | GGTGGCAGCCTCACCAATTCCAGGGCTACC |
Tgfbr3l SF-1 site 2 mut R | GGTAGCCCTGGAATTGGTGAGGCTGCCACC |
TGFBR3L SF-1 site 1 mut F | CCAGAGCCAATGCCCAATTCCTGAGGGGATTAAGGG |
TGFBR3L SF-1 site 1 mut R | CCCTTAATCCCCTCAGGAATTGGGCATTGGCTCTGG |
TGFBR3L SF-1 site 2 mut F | GGCGGCCCTGTAATTGGCAAGGAGGGAGGCA |
TGFBR3L SF-1 site 2 mut R | TGCCTCCCTCCTTGCCAATTACAGGGCCGCC |
qPCR primers | |
Fshb F | GTGCGGGCTACTGCTACACT |
Fshb R | CAGGCAATCTTACGGTCTCG |
Gnrhr F | TTCGCTACCTCCTTTGTCGT |
Gnrhr R | CACGGGTTTAGGAAAGCAAA |
Lhb F | ACTGTGCCGGCCTGTCAACG |
Lhb R | AGCAGCCGGCAGTACTCGGA |
Nr5a1 F | AGGAGTTCGTCTGTCTCAAGTTCCT |
Nr5a1 R | ACAAGGTGTAATCCAACAGGGCAG |
Rpl19 F | CGGGAATCCAAGAAGATTGA |
Rpl19 R | TTCAGCTTGTGGATGTGCTC |
Tgfbr3l F | CCTGACACCAGTGCCTTTGA |
Tgfbr3l R | CTAGGGGACGGACGAGGTAT |
Tgfbr3l SF-1 ChIP qPCR F | TCAGTACATCAAGAAAGCCC |
Tgfbr3l SF-1 ChIP qPCR R | GTACCCAGCCCTCTAGGT |
Gene desert qPCR F | GTCACAGAAACGCAAAGGTTTA |
Gene desert qPCR R | CCCAAAGTCATGTTGTACTTGATAG |
Genotyping primers | |
GRIC F | GGACATGTTCAGGGATCGCCAGGC |
GRIC R | GCATAACCAGTGAAACAGCATTGCTG |
Nr5a1 F | AGGAGTTCGTCTGTCTCAAGTTCC |
Nr5a1 R | ACAAGGTGTAATCCAACAGGGCAG |
Nr5a1 R (recombinant) | TGCGTGCAATCCATCTTGTTCAAT |