Table 2. Predicted Properties of Four Compactin Designsa.
design | P450pra | PD0001 | PD0060 | PD0175 | PD0254 |
---|---|---|---|---|---|
residues at positions 76, 80, 95, 179, 180, 182, 286, 388 | FPTMVVTA | FAVMVVVA | FAFMTVNA | VAWMVVMA | FFVGMTWG |
Rosetta energy score | 132.6 | 132.6 | 130.9 | 132.2 | 128.2 |
Yasara-predicted binding energy (kcal/mol) | 9.5 | 9.5 | 10.3 | 10.3 | 10.4 |
predicted dissociation constant (μM) | 110 | 110 | 28.9 | 27.9 | 23.8 |
The four designs represent low-energy sequences with conformations selected by docking simulations with Rosetta, optimized for pravastatin production.