TABLE 4.

Oligonucleotides used in this study

Purpose	Oligonucleotide	sequence (5′–3′)
qRT-PCR	7013-F	TTCGGGCAGTTCTTCGACC
	7013-R	CGTCAGGACCATGGGTGAT
	7014-F	GAAGGAAATGGCTCCCTTCA
	7014-R	GAATACCGCCGTGTCATAGTT
	5806-F	TTGGCACGGATCAGAATGC
	5806-R	GGTGGTGATGCCATTGAAG
	mcoA-F	GGCCAGGGCTACAACATG
	mcoA-R	CACCGTTCTTGATCTTCC
	mnxG-F	ACTACATCGACGCCCAGGG
	mnxG-R	GAAGTGGCAGTGGTAGATG
	ropD-F	GACGACGAAGAAGACGAAGAAG
	rpoD-R	ATCGGAAACAGCGGTGAAG
	pilZ-F	CTTCATGCTGCTGGGAGAAA
	pilZ-R	GCAGTTGCGTTCGTCCT
Promoter cloning in pPROBE-KT	7013p-F	AATGCAAGCTTGAACGGTCAGGACAGTATTACC
	7013p-R	CTGAGGATCCGAAGTTGGCCATCTTTATGTC
	7014p-F	AATGCAAGCTTATTATGAGAGGGCCGCTTC
	7014p-R	CTGAGGATCCGAAGTTGGCCATATTTGTTTCC
Locating transposition insertion site	Arb-PCR	CGCAAACCAACCCTTGGCAG
	Arb1	GGCCAGCGAGCTAACGAGAC
	Arb1b	GGCCAGCGAGCTAACGAGACNNNNGATAT
	Almar3-seq	ACATATCCATCGCGTCCGCC