TABLE 2.
C. trachomatis proteins identified in mitochondria from infected cells
| Gene (plasmid) or plasmid | Annotated function, gene name | No. of unique peptides | Coverage (%) | MitoProt MTS predictiona |
|---|---|---|---|---|
| CTL0259 (CT004) | Aspartyl/glutamyl-tRNA amidotransferase subunit B, gatB | 2 | 5 | 0.012 |
| CTL0277 (CT022) | Type B 50S ribosomal protein L31, rpmE2 | 2 | 24 | 0.047 |
| CTL0283 (CT028) | 50S ribosomal protein L19, rplS | 3 | 26 | 0.146 |
| CTL0301 (CT045) | Leucyl aminopeptidase, pepA | 4 | 8 | 0.015 |
| CTL0321 (CT065) | ADP, ATP carrier protein, ntp1 | 3 | 4 | 0.229 |
| CTL0322 (CT066) | Hypothetical protein | 2 | 23 | 0.342 |
| CTL0323 (CT067) | ABC transporter substrate-binding protein, ytgA | 4 | 16 | 0.578 |
| CTL0365 (CT110) | Chaperonin, groL | 33 | 79 | 0.168 |
| CTL0381 (CT126) | 30S ribosomal protein S9, rpsI | 5 | 47 | 0.716 |
| CTL0423 (CT170) | Tryptophan synthase subunit B, trpB | 13 | 38 | 0.161 |
| CTL0519 (CT267) | DNA binding protein, ihfA | 3 | 46 | 0.530 |
| CTL0544 (CT292) | Deoxyuridine 5′-triphosphate nucleotidohydrolase, dut | 2 | 28 | 0.042 |
| CTL0567 (CT315) | DNA-directed RNA polymerase subunit beta, rpoB | 9 | 11 | 0.047 |
| CTL0568 (CT316) | 50S ribosomal protein L7/L12, rplL | 2 | 20 | 0.209 |
| CTL0570 (CT318) | 50S ribosomal protein L1, rplA | 4 | 18 | 0.049 |
| CTL0595 (CT341) | Chaperone protein, dnaJ | 3 | 11 | 0.003 |
| CTL0655 (CT398) | Hypothetical protein | 3 | 19 | 0.013 |
| CTL0679 (CT421.1) | Hypothetical protein | 3 | 30 | 0.699 |
| CTL0696 (CT437) | Elongation factor G, fusA | 19 | 32 | 0.132 |
| CTL0752 (CT491) | Transcription termination factor, rho | 4 | 11 | 0.040 |
| CTL0769 (CT507) | DNA-directed RNA polymerase subunit alpha, rpoA | 4 | 18 | 0.052 |
| CTL0770 (CT508) | 30S ribosomal protein S11, rpsK | 3 | 31 | 0.907 |
| CTL0771 (CT509) | 30S ribosomal protein S13, rpsM | 4 | 35 | 0.325 |
| CTL0774 (CT512) | 30S ribosomal protein S5, rpsE | 2 | 10 | 0.156 |
| CTL0776 (CT514) | 50S ribosomal protein L6, rplF | 3 | 25 | 0.629 |
| CTL0786 (CT524) | 30S ribosomal protein S19, rpsS | 2 | 14 | 0.759 |
| CTL0788 (CT526) | 50S ribosomal protein L23, rplW | 3 | 45 | 0.300 |
| CTL0789 (CT527) | 50S ribosomal protein L4, rplD | 4 | 24 | 0.018 |
| CTL0791 (CT529) | Putative inclusion membrane protein | 3 | 20 | 0.970 |
| CTL0863 (CT600) | Peptidoglycan-associated lipoprotein, pal | 2 | 15 | 0.509 |
| CTL0866 (CT603) | Thioredoxin peroxidase, ahpC | 11 | 74 | 0.280 |
| CTL0872 (CT608) | ATP-dependent DNA helicase, uvrD | 2 | 6 | 0.203 |
| CTL0874 (CT610) | Virulence protein, CADD | 5 | 44 | 0.259 |
| CTL0882 (CT618) | Putative inclusion membrane protein | 4 | 29 | 0.817 |
| CTL0018 (CT650) | Recombinase RecA | 3 | 10 | 0.021 |
| CTL0024 (CT655) | 2-dehydro-3-deoxyphosphooctonate aldolase, kdsA | 3 | 25 | 0.012 |
| CTL0046 (CT677) | Ribosome recycling factor, frr | 2 | 20 | 0.043 |
| CTL0060 (CT691) | Hypothetical protein | 2 | 8 | 0.072 |
| CTL0112 (CT743) | Histone H1-like protein, hctA | 2 | 14 | 0.332 |
| CTL0137 (CT768) | Hypothetical protein | 4 | 8 | 0.006 |
| CTL0140 (CT771) | Hydrolase | 3 | 25 | 0.080 |
| CTL0142 (CT773) | Leucine dehydrogenase, ldh | 4 | 18 | 0.009 |
| CTL0168 (CT799) | 50S ribosomal protein L25, rplY | 5 | 21 | 0.287 |
| CTL0183 (CT812) | Polymorphic membrane protein, pmpD | 6 | 7 | 0.009 |
| CTL0213 (CT841) | ATP-dependent zinc metalloprotease, ftsH | 3 | 9 | 0.0081 |
| CTL0233 (CT858) | Protease-like activity factor, CPAF | 2 | 5 | 0.914 |
| CTL0250 (CT871) | Polymorphic membrane protein, pmpG | 4 | 7 | 0.412 |
| CTL0254 (CT874) | Polymorphic membrane protein, pmpI | 3 | 4 | 0.011 |
| pL2-03 (pGP1) | Putative helicase | 2 | 7 | 0.038 |
a
See reference 25.