TABLE 2.
Households with two or more incident SARS-CoV-2 infections within a 14-day period
| Household | No. of specimens sequenced | Date of first specimen (mo/day/yr) | Days between first and last specimen | Nextclade cladea | PANGO lineageb | Mean consensus diffc |
|---|---|---|---|---|---|---|
| PR1 | 3 | 9/2/20 | 6 | 20C | B.1.426 | 0 |
| UT1 | 3 | 10/14/20 | 1 | 20G | B.1.2 | 0 |
| PR2 | 4 | 10/24/20 | 6 | 20C | B.1.588 | 0.5 |
| UT2 | 4 | 11/17/20 | 7 | 20B | B.1.1 | 0.5 |
| UT3 | 6 | 11/24/20 | 8 | 20G | B.1.2 | 1.4 |
| UT4 | 4 | 11/30/20 | 7 | 20B | B.1.1 | 1.5 |
| UT5 | 2 | 12/2/20 | 1 | 20A | B.1.400 | 1 |
| UT6 | 3 | 12/3/20 | 7 | 20G | B.1.2 | 0.67 |
| PR3 | 4 | 12/3/20 | 8 | 20B | B.1.1.486 | 1.17 |
| UT7 | 3 | 12/15/20 | 13 | 20A | B.1.596 | 0 |
| UT8 | 2 | 12/28/20 | 4 | 21C (Epsilon) | B.1.429 | 0 |
| UT9 | 2 | 1/12/21 | 2 | 20A | B.1.400 | 0 |
| NY1 | 3 | 1/29/21 | 6 | 21F (iota) | B.1.526 | 0.67 |
| PR4 | 2 | 2/8/21 | 0 | 20A | B.1.240 | 0 |
| NY2 | 3 | 2/9/21 | 0 | 21F (Iota) | B.1.526 | 0 |
| NY3 | 3 | 2/11/21 | 7 | 20C | B.1.582 | 0 |
| NY4 | 2 | 2/21/21 | 12 | 21F (iota) | B.1.526 | 0 |
| NY5 | 2 | 2/23/21 | 0 | 21F (Iota) | B.1.526 | 0 |
| NY6 | 6 | 2/24/21 | 15 | 20C | B.1.637 | 1.13 |
| UT10 | 2 | 3/1/21 | 14 | 21C (Epsilon) | B.1.427 | 2 |
| NY7 | 3 | 3/3/21 | 13 | 20C | B.1.637 | 0 |
| NY8 | 2 | 3/22/21 | 13 | 21F (Iota) | B.1.526 | 0 |
| PR5 | 2 | 3/23/21 | 7 | 20B | R.1 | 0 |
| PR6 | 3 | 4/23/21 | 0 | 20I (Alpha, V1) | Q.4 | 0 |
| UT11 | 3 | 7/26/21 | 15 | 21J (Delta) | AY.44 | 0 |
| UT12 | 2 | 8/4/21 | 0 | 21J (Delta) | AY.44 | 1 |
a
Defined using nextclade (https://clades.nextstrain.org).
b
Defined using pango (https://cov-lineages.org/resources/pangolin.html).
c
Total number of pairwise unambiguous consensus differences between sequences, divided by total number of sequences in a household.