TABLE 2.
Locus tag | Gene | Protein name | Protein function/comment | Log2 FC | Ref. |
---|---|---|---|---|---|
Depleted | |||||
PA0196 | pntB | Pyridine nucleotide transhydrogenase, beta subunit | Regulation of NAD(P)+/NAD(P)H redox homeostasis | −7.27 | 111 |
PA1680 | Predicted 3-oxoadipate enol-lactonase activity | Predicted role in benzoate catabolism | −6.46 | 112 | |
PA1555 | ccoP2 | Cytochrome c oxidase, cbb3-type, CcoP subunit | Respiratory electron transfer chain component | −6.36 | |
PA2840 | ATP-dependent RNA helicase | Regulation of type 3 secretion system | −6.30 | 113 | |
PA1297 | aitP | Metal transporter | Fe2+ and Co2+ export | −6.18 | 114 |
PA3321 | Transcriptional regulator | −6.10 | |||
PA0141 | Polyphosphate kinase | GTP synthesis | −6.06 | 115 | |
PA5118 | thiI | Thiazole biosynthesis protein | Thiazole synthesis | −6.02 | |
PA1964 | ATP-binding component of ABC transporter | Transport | −5.98 | ||
PA4243 | secY | Secretion protein SecY | Protein export | −5.93 | |
Enriched | |||||
PA3330 | Probable short-chain dehydrogenase | Regulated by quorum sensing | 8.62 | 116 | |
PA4214a PA1903a |
phzE1
phzE2 |
Phenazine biosynthesis protein PhzE Phenazine biosynthesis protein PhzE |
Phenazine (pyocyanin) biosynthesis, host interaction Phenazine (pyocyanin) biosynthesis, host interaction |
7.90 7.90 |
117 |
PA4216a PA1905a |
phzG1
phzG2 |
Probable pyrridoxamine 5′-phosphate oxidase Probable pyrridoxamine 59-phosphate oxidase |
7.33 7.33 |
||
PA3280 | oprO | Pyrophosphate-specific outer membrane porin OprO | Phosphate and diphosphate transport | 6.45 | 51 |
PA3279 | oprP | Phosphate-specific outer membrane porin OprP | 6.36 | ||
PA5360 | phoB | Two-component response regulator PhoB | Transcriptional regulation in response to Pi starvation | 6.33 | 118 |
PA4211 | phzB1 | Phenazine biosynthesis protein | Phenazine biosynthesis | 6.13 | 117 |
PA0690 | pdtA | Phosphate depletion regulated two-partner secretion system partner A | Secretion system involved in virulence | 5.97 | 119 |
PA0696 | Hypothetical protein | Unknown, part of the σVreI regulon, upregulated by Pi | 5.92 | 120, 121 | |
PA0698 | Hypothetical protein | 5.80 |
Proteins of the same sequence.