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. 2022 Nov 10;10(6):e02590-22. doi: 10.1128/spectrum.02590-22

TABLE 2.

Proteins with largest changes in abundance after growth in minimal medium plus 0.2 mM Pi compared to minimal medium plus 1 mM Pi

Locus tag Gene Protein name Protein function/comment Log2 FC Ref.
Depleted
 PA0196 pntB Pyridine nucleotide transhydrogenase, beta subunit Regulation of NAD(P)+/NAD(P)H redox homeostasis −7.27 111
 PA1680 Predicted 3-oxoadipate enol-lactonase activity Predicted role in benzoate catabolism −6.46 112
 PA1555 ccoP2 Cytochrome c oxidase, cbb3-type, CcoP subunit Respiratory electron transfer chain component −6.36
 PA2840 ATP-dependent RNA helicase Regulation of type 3 secretion system −6.30 113
 PA1297 aitP Metal transporter Fe2+ and Co2+ export −6.18 114
 PA3321 Transcriptional regulator −6.10
 PA0141 Polyphosphate kinase GTP synthesis −6.06 115
 PA5118 thiI Thiazole biosynthesis protein Thiazole synthesis −6.02
 PA1964 ATP-binding component of ABC transporter Transport −5.98
 PA4243 secY Secretion protein SecY Protein export −5.93
Enriched
 PA3330 Probable short-chain dehydrogenase Regulated by quorum sensing 8.62 116
 PA4214a
 PA1903a
phzE1
phzE2
Phenazine biosynthesis protein PhzE
Phenazine biosynthesis protein PhzE
Phenazine (pyocyanin) biosynthesis, host interaction
Phenazine (pyocyanin) biosynthesis, host interaction
7.90
7.90
117
 PA4216a
 PA1905a
phzG1
phzG2
Probable pyrridoxamine 5′-phosphate oxidase
Probable pyrridoxamine 59-phosphate oxidase
7.33
7.33
 PA3280 oprO Pyrophosphate-specific outer membrane porin OprO Phosphate and diphosphate transport 6.45 51
 PA3279 oprP Phosphate-specific outer membrane porin OprP 6.36
 PA5360 phoB Two-component response regulator PhoB Transcriptional regulation in response to Pi starvation 6.33 118
 PA4211 phzB1 Phenazine biosynthesis protein Phenazine biosynthesis 6.13 117
 PA0690 pdtA Phosphate depletion regulated two-partner secretion system partner A Secretion system involved in virulence 5.97 119
 PA0696 Hypothetical protein Unknown, part of the σVreI regulon, upregulated by Pi 5.92 120, 121
 PA0698 Hypothetical protein 5.80
a

Proteins of the same sequence.