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. Author manuscript; available in PMC: 2024 Jan 1.
Published in final edited form as: Psychosom Med. 2022 Oct 3;85(1):89–97. doi: 10.1097/PSY.0000000000001147

Table 2.

The significant 13 DMPs ranked by p-value associated with optimism in site-by-site meta-analyses based on the homogeneous probes in both race/ethnicity and gender in WHI and NAS.

CpG Annotated gene a Other close gene a Chr Position a p-value Difference in DNAm b SE c Heterogeneity I2 (%), p-value d

cg23032421 IL5RA - 3 3152038 2.68×10−06 2.12×10−04 4.52×10−05 0.00, 0.68
cg24856537 NOTCH4 - 6 32169929 3.72×10−06 1.41×10−04 3.05×10−05 19.52, 0.28
cg18583565 - MGMT 10 131567980 8.55×10−06 −1.70×10−04 3.79×10−05 0.00, 0.78
cg00702840 - MDH2 7 75703958 1.15×10−05 −1.20×10−04 2.62×10−05 0.00, 0.78
cg04219552 - DYSF 2 72126504 1.52×10−05 9.17×10−05 2.12×10−05 0.00, 0.66
cg05372549 SRM - 1 11119861 2.45×10−05 2.29×10−05 5.42×10−06 0.00, 0.87
cg15560586 CSNK1G1 - 15 64648483 2.73×10−05 −3.10×10−05 7.39×10−06 0.00, 0.54
cg03451670 AGAP1 - 2 236579469 3.14×10−05 −2.50×10−04 5.91×10−05 0.00, 0.48
cg05065507 TACSTD2 - 1 59042931 3.24×10−05 −3.10×10−04 7.44×10−05 0.00, 0.76
cg06418871 MARVELD2 - 5 68710831 3.26×10−05 −2.60×10−04 6.28×10−05 0.00, 0.70
cg24329557 GCM2 - 6 10882326 3.45×10−05 2.53×10−04 6.11×10−05 0.00, 0.43
cg27288968 PAXBP1 - 21 34106765 3.76×10−05 1.37×10−04 3.32×10−05 0.00, 0.91
cg16303846 DOCK10 - 2 225907539 5.10×10−05 −5.70×10−05 1.41×10−05 0.00, 0.95

Note: The models adjusted for age, race/ethnicity (WHI_AS315 and WHI_BAA23 only), education, smoking status, pack-years, body mass index, case status (WHI_BAA23 only), and methylation-related technical covariates.

Abbreviations: DMPs, differentially methylated probes; CpG, cytosine-phosphate-guanine; DNAm, DNA methylation; Chr, chromosome; SE, standard error; I2, I-squared.

a

The University of California Santa Cruz UCSC database (GRCh37/hg19)

b

Difference in DNAm level (% 5mC) per 1% increase of maximum possible in optimism

c

Standard error in DNAm level (% 5mC) per 1% increase of maximum possible in optimism

d

I2 < 50% and p-value of heterogeneity > 0.05 were considered as homogenous across sub-studies