Table 1.
Disk space requirements for analytic protocols
| Data (Gb) | Analysis (Gb) | |
|---|---|---|
| TCGA | ||
| Pre-processing (genotyping data) | 210 | 440 |
| Immune Traits (Table S2) (Sayaman et al., 2021) | 0.005 | 0.075 |
| Heritability Analysis (Table S1) (Sayaman et al., 2021) | 0.005 | 55 |
| GWAS (Table S1) (Sayaman et al., 2021) | 0.005 | 155 |
| eQTL (gene expression matrix) | 4 | 8 |
| sQTL (sqtl stats) | 95 | 25 |
| Colocalization | – | 25 |
| Rare Variant Analysis (WES) | 500 | 64 |
| GTEx | ||
| eQTL (summary stats) | 190 | 30 |
| sQTL (summary stats) | 695 | |
| Colocalization (genotyping data) | 15 | 160 |
| Roadmap epigenomics project | ||
| Epigenomic Analysis | 0.3 | 0.035 |