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. 2022 Dec 1;25(12):105684. doi: 10.1016/j.isci.2022.105684
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and virus strains

Escherichia coli CGC OP50

Chemicals, peptides, and recombinant proteins

Octanol Sigma-Aldrich Cat#112615
Glycerol Sigma-Aldrich Cat#G5516
Isoamyl alcohol Sigma-Aldrich Cat#AX1440
Na-acetate Sigma-Aldrich Cat#S2889
Diacetyl Sigma-Aldrich Cat#B0682
Ethyl alcohol Pharmco Cat#111000200
Chloroform Sigma-Aldrich Cat#C2432
Dimethyl sulfoxide Sigma-Aldrich Cat#D5879
Bicuculline VWR Cat#TBC1890
α-MDG Sigma-Aldrich Cat#102987-308
Nifedipine Thomas Scientific Cat#C931M79
KCl Sigma-Aldrich Cat#9541
NaN3 Sigma-Aldrich Cat#S2002
Gluture Fisher Scientific Cat#NC0632797

Experimental models: Organisms/strains

N2 CGC81 N2
clh-3(ok768) CGC82 RB905
egl-36(n728n398) CGC83 KP1008
ent-4(ok2161) CGC82 VC1934
glc-3(ok321) CGC82 RB594
glt-5(bz70) CGC84 ZB1099
glt-5(ok1987) CGC82 RB1615
gtl-1(ok375) CGC82 VC244
kcc-1(ok648) CGC82 VC476
kcc-1(ok692) CGC82 VC542
tax-2(p691) CGC36 PR691
kqt-2(ok732) CGC82 RB883
nsls109 [F16F9.3p::DTA(G53E) +unc-122p::GFP] CGC16 OS2248
odr-3(n2150) CGC85 CX2205
kyIs722 [str-2p::GCaMP5(D380Y) + elt-2::mCherry] CGC CX17256
kqt-2(tm642) NBRP N/A
best-9(tm7876) NBRP N/A
Ex[PT02B11.3::abts-4 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC340
Ex[PT02B11.3::best-9 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC342
Ex[PT02B11.3::clh-3 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC337
Ex[PT02B11.3::egl-36 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC336
Ex[PT02B11.3::glc-3 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC345
Ex[PT02B11.3::kcc-1 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC329
Ex[PT02B11.3::twk-21 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC350
Ex[PT02B11.3::twk-33 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC338
Ex[PT02B11.3:kqt-2 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC358
Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC400
clh-3(ok768);Ex[PT02B11.3::clh-3b cDNA + Punc-122::GFP] This study BLC356
kcc-1(ok648);Ex[PT02B11.3::SLC12A4 + Punc-122::GFP] This study BLC547
best-9(tm7876);Ex[PT02B11.3::best-9 cDNA + Punc-122::GFP] This study BLC551
egl-36(n728n398);Ex[PT02B11.3::egl-36 cDNA + Punc-122::GFP] This study BLC552
ent-4(ok2161);Ex[PT02B11.3::ent-4 cDNA + Punc-122::GFP] This study BLC555
kqt-2(ok732);Ex[PT02B11.3::kqt-2 cDNA + Punc-122::GFP] This study BLC491
Ex[PT02B11.3::unc-25 RNAi + unc-122p::GFP] This study BLC500
best-9(tm7876);[osm-10::GFP + lin-15(+)] This study BLC554
clh-3(ok768); [gcy-5p::GFP + lin-15(+)] This study BLC553
clh-3(ok768);[osm-10::GFP + lin-15(+)] This study BLC548
clh-3(ok768);[str-2::GFP + lin-15(+)] This study BLC550
egl-36(n728n398);[osm-10::GFP + lin-15(+)] This study BLC556
egl-36(n728n398);[str-2::GFP + lin-15(+)] This study BLC560
ent-4(ok2161);[osm-10::GFP + lin-15(+)] This study BLC557
kcc-1(ok648);[osm-10::GFP + lin-15(+)] This study BLC558
kcc-1(ok648);[str-2::GFP + lin-15(+)] This study BLC561
kqt-2(ok732);[osm-10::GFP + lin-15(+)] This study BLC559
best-9(tm7876);Ex[PT02B11.3::GCaMP6s + Punc-122::GFP] This study BLC562
clh-3(ok768);Ex[PT02B11.3::GCaMP6s + Punc-122::GFP] This study BLC563
egl-36(n728n398);Ex[PT02B11.3::GCaMP6s + Punc-122::GFP] This study BLC564
ent-4(ok2161);Ex[PT02B11.3::GCaMP6s + Punc-122::GFP] This study BLC566
kcc-1(ok648);Ex[PT02B11.3::GCaMP6s + Punc-122::GFP] This study BLC565
kqt-2(ok732);Ex[PT02B11.3::GCaMP6s + Punc-122::GFP] This study BLC567
best-9(tm7876);Ex[PT02B11.3::GCaMP6s + Punc-122::GFP] This study BLC568
egl-36(n728n398);Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC570
ent-4(ok2161);Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC572
kcc-1(ok648);Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC573
kqt-2(ok732);Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC 492
best-9(tm7876);Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC572
egl-36(n728n398);Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC577
ent-4(ok2161);Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC578
kcc-1(ok648);Ex[pSra-6::GCaMP-6s + unc-122::GFP] This study BLC579
clh-3(ok768);[str-2p::GCaMP5(D380Y) + elt-2::mCherry] This study BLC574
egl-36(n728n398);[str-2p::GCaMP5(D380Y) + elt-2::mCherry] This study BLC524
kcc-1(ok648);[str-2p::GCaMP5(D380Y) + elt-2::mCherry] This study BLC575
clh-3(ok768);Ex[PT02B11.3::clh-3b cDNA + Punc-122::GFP];[str-2p::GCaMP5(D380Y) + elt-2::mCherry] This study BLC583
egl-36(n728n398);Ex[PT02B11.3::egl-36 cDNA + Punc-122::GFP];[str-2p::GCaMP5(D380Y) + elt-2::mCherry] This study BLC584
kcc-1(ok648);Ex[PT02B11.3::SLC12A4 + Punc-122::GFP];[str-2p::GCaMP5(D380Y) + elt-2::mCherry] This study BLC585
best-9(tm7876);Ex[pSra-6::GCaMP-6s + unc-122::GFP + PT02B11.3::best-9 cDNA + Pmec-4::mcherry] This study BLC587
egl-36(n728n398);Ex[pSra-6::GCaMP-6s + unc-122::GFP + PT02B11.3::egl-36 cDNA + Pmec-4::mcherry] This study BLC588
ent-4(ok2161);Ex[pSra-6::GCaMP-6s + unc-122::GFP + PT02B11.3::ent-4 cDNA Pmec-4::mcherry] This study BLC580
kcc-1(ok648);Ex[pSra-6::GCaMP-6s + unc-122::GFP + PT02B11.3::SLC12A4 cDNA + Pmec-4::mcherry] This study BLC581
kqt-2(ok732);Ex[pSra-6::GCaMP-6s + unc-122::GFP + PT02B11.3::kqt-2 cDNA + Pmec-4::mcherry] This study BLC582
kcc-1(ok648);Ex[pSra-6::GCaMP-6s + unc-122::GFP + PT02B11.3::kcc-1a cDNA + Pmec-4::mcherry] This study BLC648
kcc-1(ok648);Ex[pSra-6::GCaMP-6s + unc-122::GFP + Pstr-2::kcc-1a cDNA + Pmec-4::mcherry] This study BLC649
best-9(tm7876);Ex[pT02B11.3::SuperClomeleon] This study BLC616
kcc-1(ok648);Ex[pT02B11.3::SuperClomeleon] This study BLC628
clh-3(ok768);Ex[pT02B11.3::SuperClomeleon] This study BLC621
Ex[pT02B11.3::SuperClomeleon] This study BLC498
best-9(tm7876);Ex[PT02B11.3::kcc-1 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC567
kqt-2(ok732);Ex[PT02B11.3::egl-36 RNAi + unc-122p::GFP + Pvap-1::RFP] This study BLC571
clh-3(ok768);kcc-1(ok648) This study BLC605
Ex[PT02B11.3:egl-19 RNAi + unc-122p::GFP] This study BLC630

Oligonucleotides

pPD95_75 A gift from Andrew Fire RRID:Addgene_1494
pPD95_75 (pSra-6::::GCaMP-6s) This study N/A
pPD95_75 (pT02B11.3::SLC12A4) This study N/A
pPD95_75 (pT02B11.3::clh-3b cDNA) This study N/A
pPD95_75 (pT02B11.3::kcc-1a cDNA) This study N/A
pPD95_75 (pstr-2::kcc-1a cDNA) This study N/A
pPD95_75 (pT02B11.3::sense kcc-1 RNAi) This study N/A
pPD95_75 (pT02B11.3::antisense kcc-1 RNAi) This study N/A
pPD95_75 (pT02B11.3::sense abts-4 RNAi) This study N/A
pPD95_75 (pT02B11.3::antisense abts-4 RNAi) This study N/A
pPD95_75 (pT02B11.3::sense best-9 RNAi) This study N/A
pPD95_75 (pT02B11.3::antisense best-9 RNAi) This study N/A
pPD95_75 (pT02B11.3::sense clh-3 RNAi) This study N/A
pPD95_75 (pT02B11.3::antisense clh-3 RNAi) This study N/A
pPD95_75 (pT02B11.3::sense egl-36 RNAi) This study N/A
pPD95_75 (pT02B11.3::antisense egl-36 RNAi) This study N/A
pPD95_75 (pUnc-122::GFP) (Grant et al., 2015)20 N/A
pPD95_75 (pVap-1::RFP) (Johnson et al., 2020)22 N/A
pPD95_75 (pT02B11.3::sense glc-3 RNAi) This study N/A
pPD95_75 (pT02B11.3::antisense glc-3 RNAi) This study N/A
pPD95.75 (pT02B11.3::sense twk-33 RNAi) This study N/A
pPD95.75 (pT02B11.3::antisense twk-33 RNAi) This study N/A
pPD95_75 (pT02B11.3::SuperClomeleon) This study N/A
pPD95_75 (pT02B11.3::sense twk-21 RNAi) This study N/A
pPD95_75 (pT02B11.3::antisense twk-21 RNAi) This study N/A
pPD95_75 (pT02B11.3::sense kqt-2 RNAi) This study N/A
pPD95_75 (pT02B11.3::antisense kqt-2 RNAi) This study N/A
pPD95_75 (pT02B11.3::best-9 cDNA) This study N/A
pPD95_75 (pT02B11.3::ent-4 cDNA) This study N/A
pPD95_75 (pT02B11.3::kqt-2 cDNA) This study N/A
pMec-4::mcherry This study N/A
pT02B11.3::sense egl-19 RNAi This study N/A
pT02B11.3::antisense egl-19 RNAi This study N/A

Software and algorithms

Fiji (ImageJ) NIH http://fiji.sc
RRID:SCR_002285
Micro-manager Vale Lab, UCSF https://micro-manager.org/
RRID:SCR_000415
RStudio RStudio http://www.rstudio.com/
RRID:SCR_000432
GraphPad Prism GraphPad software http://www.graphpad.com/
RRID:SCR_002798