Table 3.
Ramachandran plot statistics, ERRAT, and Verify3D scores for the A36R protein generated models using C-I-TASSER and RaptorX server.
| MF regionsa (%) | AA regionsb (%) | GA regionsc (%) | DA regionsd (%) | G-factorse | ERRAT scoref (%) | Verify 3D scoreg (%) | |
|---|---|---|---|---|---|---|---|
| C-I-TASSER | 86.1 | 9.5 | 1.3 | 3.2 | −0.06 | 93.08 | 75.60 |
| RaptorX | 87.3 | 8.2 | 0.0 | 4.4 | 0.04 | 94.90 | Fewer than 80 |
Abbreviation: C-I-TASSER, Contact-guided Iterative Threading ASSEmbly Refinement.
a
Ramachandran plot: Residues in most favored regions [A, B, L].
b
Ramachandran plot: Residues in additional allowed regions [a, b, l, p].
c
Ramachandran plot: Residues in generously allowed regions [∼a, ∼b, ∼l, ∼p].
d
Ramachandran plot: Residues in disallowed regions.
e
Ramachandran plot: Overall G-factors.
f
Overall quality factor generated by ERRAT server.
g
Averaged 3D-1D score generated by Verify3D server.