Table 2.
HAstV genotypes detected in 2018–2019
| Collection period | HAstV 1 | HAstV 3 | HAstV 4 | HAstV 5 | HAstV 8 | HAstV classic* | MLB1 | MLB2 | VA1 | VA2 | total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 2018 | 4 | 2 | 2 | 0 | 0 | 3 | 5 | 1 | 0 | 0 | 17 |
| 2019 | 3 | 3 | 0 | 1 | 0 | 1 | 3 | 1 | 1 | 1 | 14 |
| No collection date available | 1 | 0 | 1 | 0 | 1 | 0 | 2 | 1 | 3 | 0 | 9 |
| Total | 8 (20%) | 5 (12.5%) | 3 (7.5%) | 1 (2.5%) | 1 (2.5%) | 4 (10%) | 10 (25%) | 3 (7.5%) | 4 (10%) | 1 (2.5%) | 40 |
*A sample was defined as HAstV classic if only a fragment of PCR screening assay could be sequenced (~ 170 bp), the short sequence cannot discriminate HAstV classic genotypes. From nine positive HAstV samples the collection date was not available