TABLE 2.
Comparison and homology of sub-amino-terminal sequences within ML family isolates
| Peptidea | Sequenceb | % Similarity | Location in M protein |
|---|---|---|---|
| ML2 family | |||
| 203246–59 | KVEEEHKKDHEKLE | B repeat | |
| BSA10(54–67) | -------------- | 100 | |
| NS14(45–58) | --K------K---- | 93 | |
| ML60 family | |||
| 203440–59 | DDKEKDPQYRALMGENQDLR | Nonrepetitive region | |
| 2080(56–75) | -NIR---------------M | 85 | |
| Y530S(41–60) | -NTR---------------M | 85 | |
| TIN family | |||
| Y504S45–64 | EETKNKELDKKNKELDSRVT | Follows A repeat | |
| 90/85(39–58) | LLD-QE--E-E-EK---Q-A | 45 | |
| 88/544(41–60) | LTE--E-------K---Q-D | 65 | |
| M52/53/80 family | |||
| 88/2533–53 | SENEELQAGLQEKERELEDL | A1 repeat | |
| 2072(39–58) | ------K-D--K--Q--KN- | 70 | |
| NS27(37–56) | --K---ETE-----Q--KN- | 65 | |
| NS5(36–55) | ----G-K-------Q--KN- | 75 | |
| 87/156(35–54) | ------K-D--K--Q--KN- | 70 | |
| 2317(34–53) | -A----ETT--K--Q--KG- | 60 | |
| M41(35–54) | RR-N--EKII--------G- | 60 | |
| M12/M55 family | |||
| 204050–69 | LKMLNRDLEQAYNELSGEAH | B1 repeat | |
| 2075(58–77) | --E--DEF---------DGV | 85 | |
| 2033(56–75) | --G--DWA-RLLQ--N--DV | 45 | |
| 2040239–258 | AALGHQHAHNEYQAKLAEKD | ||
| 2033(268–287) | -------------------- | 100 |
Subscripts in parentheses are the amino acid positions of each sequence corresponding to the peptide. Adapted from Relf (27).
Identical residues are shown as dashes.