Table 4.
The area under the precision-recall curve (AUPRC) for miRBind, CNN, and DNABERT models, as well as RNAhybrid, ‘cofold’, RNA22, and ‘seed’ approaches, tested against the 1:1, 1:10, and 1:100 Ago eCLIP test sets.
| AUPRC | Test Set 1:1 | Test Set 1:10 | Test Set 1:100 |
|---|---|---|---|
| miRbind | 0.8413 | 0.4668 | 0.1545 |
| CNN | 0.8223 | 0.4268 | 0.1147 |
| DNABERT | 0.6787 | 0.1904 | 0.0238 |
| RNAhybrid | 0.7615 | 0.2932 | 0.0469 |
| Cofold | 0.6862 | 0.1946 | 0.0246 |
| RNA22 | 0.7116 | 0.2628 | 0.0392 |
| Seed | Sens: 0.3774 Prec: 0.9278 |
Sens: 0.3774 Prec: 0.6020 |
Sens: 0.3774 Prec: 0.1586 |