Table 1.
Author (Year) |
Country | Ethnicity | Disease | Genotyping Methods | Sample Size (Case/Control) | CC | CT | TT | Newcastle-Ottawa Scale | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Case | Control | Case | Control | Case | Control | |||||||
Peters (2008) [36] |
USA | >93% Caucasian American | Advanced distal colorectal adenoma |
SNPlex or TaqMan | 745/758 | 231 | 266 | 368 | 359 | 146 | 133 | High |
Méplan (2010) [35] |
Czech Republic | Czech origin adults >29 years | Colorectal cancer |
KASPar | 729/664 | 229 | 249 | 364 | 301 | 136 | 114 | Moderate |
Steinbrecher (2010) [37] | Germany | European men | Prostate cancer | MassARRAY system | 245/490 | 77 | 156 | 114 | 229 | 54 | 105 | High |
Du (2012) [46] |
China | Chinese Han population | Kashin-Beck disease | PCR-RFLP | 216/194 | 68 | 67 | 124 | 102 | 24 | 25 | High |
Karunasinghe (2012) [20] | New Zealand | European men | Prostate cancer | TaqMan | 260/439 | 84 | 144 | 129 | 210 | 47 | 85 | High |
Jaworska (2013) [19] |
Poland | Polish adults | Laryngeal cancer |
Real-time PCR | 111/213 | 42 | 68 | 46 | 108 | 23 | 37 | High |
Lung cancer | 95/176 | 39 | 54 | 47 | 97 | 9 | 25 | |||||
Méplan (2013) [16] |
Denmark | Danish women | Breast cancer | TaqMan | 939/960 | 319 | 335 | 438 | 430 | 182 | 195 | High |
Khadzhieva (2014) [42] | Russia | Russian women | Recurrent miscarriage |
PCR-RFLP | 313/189 | 130 | 74 | 131 | 95 | 52 | 20 | Moderate |
Jablonska (2015) [17] |
Poland | Polish women | Breast cancer | TaqMan | 136/183 | 44 | 65 | 66 # | 90 # | 26 | 28 | High |
Peng (2016) [39] |
China | Chinese Han women | Pre-eclampsia (PE) | TaqMan | 1008/1386 | 333 | 402 | 497 | 661 | 178 | 323 | Moderate |
Mild PE | 158/1386 | 64 | 402 | 70 | 661 | 24 | 323 | |||||
Severe PE | 850/1386 | 269 | 402 | 427 | 661 | 154 | 323 | |||||
Early onset PE | 523/1386 | 181 | 402 | 253 | 661 | 89 | 323 | |||||
Late onset PE | 485/1386 | 152 | 402 | 244 | 661 | 89 | 323 | |||||
Xiao (2017) [23] |
China | Han Chinese | Thyroid diseases | MassARRAY system | 1022/898 | 318 | 300 | 704 * | 598 * | Moderate | ||
Graves’ disease | 675/898 | 213 | 300 | 462 * | 598 * | |||||||
Hashimoto’s thyroiditis | 347/898 | 105 | 300 | 242 * | 598 * | |||||||
da Rocha (2018) [24] |
Brazil | South Brazilian adults | Alzheimer’s disease |
TaqMan | 103/108 | 28 | 34 | 49 | 42 | 25 | 29 | Moderate |
Wigner (2018) [25] |
Poland | Adults | Depression | TaqMan | 281/229 | 87 | 83 | 141 | 138 | 53 | 8 | Moderate |
Chen (2020) [38] |
China | Chinese Han women | Pre-eclampsia (PE) | TaqMan | 631/720 | 216 | 204 | 296 | 359 | 119 | 157 | Moderate |
Mild PE | 141/720 | 47 | 204 | 66 | 359 | 28 | 157 | |||||
Severe PE | 490/720 | 169 | 204 | 230 | 359 | 91 | 157 | |||||
Early onset PE | 249/720 | 94 | 204 | 112 | 359 | 43 | 157 | |||||
Late onset PE | 382/720 | 122 | 204 | 184 | 359 | 76 | 157 | |||||
Corredor (2020) [40] |
Spain | Spanish | Hypertension | TaqMan | 403/37 | 85 | 15 | 128 | 14 | 190 | 8 | Moderate |
Huang (2020) [22] |
China | Han Chinese women | Endometriosis | TaqMan | 90/130 | 33 | 22 | 38 | 72 | 19 | 36 | Moderate |
Mashkina (2020) [43] | Russia | Russian women | Pregnancy loss | PCR-RFLP | 110/124 | 33 | 46 | 63 | 62 | 14 | 16 | Moderate |
Gusti (2021) [45] |
Saudi Arabia | Saudi adult population | Type 2 diabetes mellitus | TaqMan | 109/163 | 27 | 42 | 62 | 87 | 20 | 34 | High |
Synowiec (2021) [41] |
Poland | Caucasian | Ischemic stroke | TaqMan | 107/107 | 30 | 41 | 55 | 64 | 22 | 2 | Moderate |
Ściskalska (2022) [44] | Poland | Adults | Acute pancreatitis |
PCR-RFLP | 39/51 | 9 | 16 | 19 | 18 | 11 | 17 | High |
Wigner (2022) [26] |
Poland | Native Polish adults | Multiple sclerosis |
Real-time PCR | 142/140 | 39 | 57 | 72 | 65 | 31 | 18 | High |
# values were calculated from CT+TT values reported in the study; * the values represents CT+TT.