Table 3.
Calculated docking scores (in kcal/mol) of the compounds with the target protein.
| Compds | H-RAS, GTP active form | ||
|---|---|---|---|
| Docking score (ΔGbind) | Docked complex (amino acid–ligand) interactions | Distance [Å] | |
| 3a | − 7.9 | Ser 34—compound 3a | 2.12 |
| Ser 155—compound 3a | 2.53 | ||
| Gln 37—compound 3a | 3.29 | ||
| Val 40—compound 3a | 2.92 | ||
| Met 108—compound 3a | 3.29 | ||
| Leu 168—compound 3a | 2.68 | ||
| Val 158—compound 3a | 2.65 | ||
| Ala 53—compound 3a | 3.03 | ||
| Met 111—compound 3a | 2.43 | ||
| Ile 32—compound 3a | 2.65 | ||
| 3b | − 5.6 | Met 108—compound 3b | 3.00 |
| Leu 168—compound 3b | 3.46 | ||
| Lys 55—compound 3b | 3.29 | ||
| Arg 69—compound 3b | 2.78 | ||
| Val 40—compound 3b | 2.63 | ||
| Ser 34 —compound 3b | 2.48 | ||
| Ile 32—compound 3b | 2.25 | ||
| 4a | − 8.8 | Ser 34—compound 4a | 3.02 |
| Ser 155—compound 4a | 2.99 | ||
| Val 40—compound 4a | 3.83 | ||
| Leu 168—compound 4a | 2.73 | ||
| Met 111—compound 4a | 2.85 | ||
| Ile 32—compound 4a | 2.70 | ||
| 4b | − 7.36 | Gln 37—compound 4b | 2.65 |
| Gly 38—compound 4b | 3.31 | ||
| Val 158—compound 4b | 2.75 | ||
| Ala 53—compound 4b | 3.10 | ||
| Ile 32—compound 4b | 2.45 | ||
| Met 111—compound 4b | 2.68 | ||
| Leu 168—compound 4b | 3.57 | ||
| Asn 114—compound 4b | 3.49 | ||
| 5a | − 11.16 | Gln 117—compound 5a | 3.17 |
| Asn 114—compound 5a | 3.04 | ||
| Val 40—compound 5a | 2.99 | ||
| Gln 37—compound 5a | 3.09 | ||
| Lys 55—compound 5a | 2.72 | ||
| Met 108—compound 5a | 2.53 | ||
| Val 158—compound 5a | 2.98 | ||
| Ala 53—compound 5a | 3.05 | ||
| Leu 168—compound 5a | 2.68 | ||
| Ile 32—compound 5a | 3.32 | ||
| Glu 109—compound 5a | 3.51 | ||
| 5b | − 6.86 | Val 158—compound 5b | 3.29 |
| Ala 53—compound 5b | 3.25 | ||
| Met 108—compound 5b | 3.08 | ||
| Val 40—compound 5b | 3.12 | ||
| Leu 168—compound 5b | 3.37 | ||
| Ala 36—compound 5b | 2.59 | ||
| Val 158—compound 5b | 2.48 | ||
| Arg 69—compound 5b | 2.44 | ||
| 6a | − 9.74 | Ser 34—compound 6a | 3.00 |
| Gly 38—compound 6a | 2.99 | ||
| Ile 32—compound 6a | 2.53 | ||
| Met 111—compound 6a | 2.42 | ||
| Leu 168—compound 6a | 3.29 | ||
| Val 40—compound 6a | 3.04 | ||
| 6b | − 7.07 | Gly 38—compound 6b | 2.93 |
| Gln 37—compound 6b | 3.29 | ||
| Leu 168—compound 6b | 3.29 | ||
| Ser 155—compound 6b | 2.22 | ||
| Ala 113—compound 6b | 2.46 | ||
| Met 111—compound 6b | 2.58 | ||
| Ile 32—compound 6b | 3.04 | ||
| Asn 114—compound 6b | 3.32 | ||